DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and ppk16

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_594821.1 Gene:ppk16 / 2543567 PomBaseID:SPAC890.03 Length:672 Species:Schizosaccharomyces pombe


Alignment Length:264 Identity:99/264 - (37%)
Similarity:149/264 - (56%) Gaps:14/264 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHII 89
            :|.|.:.:.:|.|:||||.:..|.:|..||.:|...|::...|      .|||.:.:...||:|.
pombe    28 VGTYRIESVVGEGSFGKVYLAAHLLTNTKVVLKSSCRKQAIIL------AREIHHHRRLLHPNIT 86

  Fly    90 KLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            :||:|:.|...|::.|||...|||:|::.:..:|.|....|...|:...:.|.||...||||||.
pombe    87 RLYEVVCTEDRIYLAMEYCPNGELYDWVAREKRLDEKTTCRIMWQLCCAIQYLHRQGCVHRDLKL 151

  Fly   155 ENLLLDHNMHVKIADFGLSNMMLDGE-----FLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGV 214
            ||:.||...:||:.|||.|.   |.:     |:.|.||:..|.|||::.|..|.|..|||||.|:
pombe   152 ENIFLDKAYNVKLGDFGFSR---DSDCSRRTFMNTRCGTVAYCAPELVQGHKYIGECVDIWSLGI 213

  Fly   215 ILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEW 279
            |:||||.|.||||::.|....:||.:.....||.|:|...:|:..:|..|...|.:|::|..|.:
pombe   214 IMYALLIGRLPFDEDDVSLTEQKIINECPQYPETLSKNSSSLLKSLLCKDYRLRPSIDQIISHPY 278

  Fly   280 FQKD 283
            |:::
pombe   279 FKEN 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 98/259 (38%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
ppk16NP_594821.1 STKc_AMPK-like 31..278 CDD:270905 97/255 (38%)
Blue background indicates that the domain is not in the aligned region.

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