DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and ppk9

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_593404.1 Gene:ppk9 / 2541773 PomBaseID:SPAC23H4.02 Length:532 Species:Schizosaccharomyces pombe


Alignment Length:583 Identity:169/583 - (28%)
Similarity:276/583 - (47%) Gaps:96/583 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHII 89
            :|.:|||.|||.|...|||:|:|..|..|||:|::...:::..|...:::||:..|:...||:||
pombe    20 VGPWLLGRTLGQGNLAKVKLGKHFQTNEKVALKMVYNDELEDKDTWKRLQREVTILRQLHHPNII 84

  Fly    90 KLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            .||||...|....:.:||:. .:|...:|||.:|.|...|:.|:||:..:||||.|.:.|||||.
pombe    85 TLYQVFRVPKYTVLALEYMD-TDLHSMVVKHNRLDECTTRKIFRQIVHAIDYCHLHRVAHRDLKL 148

  Fly   155 ENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            ||:||:.::.||:.||||||.||||.||.||||:|:|||||||.|:.|.|.:||:|.||::||.:
pombe   149 ENILLNKDLVVKLTDFGLSNFMLDGSFLSTSCGTPHYAAPEVIQGRYYDGCDVDVWGCGILLYLM 213

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDL 284
            |.|..||:|..:..:..::..||:.||.:::....:|:.|||.|.|..|..:.||.:|.||..||
pombe   214 LVGEFPFEDVTISNVLSRVCKGIYTIPSFVSSSASDLIRQMLMVLPTSRIKVAEIMQHPWFIADL 278

  Fly   285 PAY-LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADD 348
            |.: ..||.                .:.|..|    |.|:....|  .|||.:...|.:   ...
pombe   279 PTHSRLPSR----------------TSSFSSK----HRSVTFSPP--DLAILFDPSITS---PSS 318

  Fly   349 AANQINEINNFFVAGSPPP--------PPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATP--V 403
            :..||.:..:........|        |.|.|.......::...:..:.....:.|||...|  :
pombe   319 SVGQIPQPTDHSALSPSKPMSISGTESPNPDPASLCYSSYEDLYSATSWHSDMAESSGFLDPTDI 383

  Fly   404 PPVAGGTPSSTIPIRPH-PERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTP--IKRAKWHLGIR 465
            ||:    ||:...:|.. |:|.|...::            .:....:|...|  ::..:||.||:
pombe   384 PPI----PSNVETLRSSLPQRHASFMNK------------VYNHPLSRPPAPNRLRSLRWHYGIQ 432

  Fly   466 SQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMS------------LQLYQV 518
            :...|.:::.::..|:..|...::..:      ....:|..|:...|            ::|:.:
pombe   433 TAKNPIEVLRKLCEALLELGARFRPCD------EESFLKENKYKVFSCITCHNSPVYLVIELFSI 491

  Fly   519 DAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLSVSGVMPLQPTGHHTMEFFEMCAALIIQLA 581
            ...:.::|.:..::|:                 |:.......|     |.|.|:...||:::|
pombe   492 GPSASVIDIRFSSSDD-----------------SIKYTSSYSP-----MPFLEVVKQLILKIA 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 112/254 (44%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/62 (18%)
AMPKA_C 457..580 CDD:213378 20/134 (15%)
ppk9NP_593404.1 STKc_AMPK-like 22..273 CDD:270905 111/251 (44%)
AMPKA_C_like 426..531 CDD:473060 20/132 (15%)

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