DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Gm4922

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_808374.1 Gene:Gm4922 / 237300 MGIID:3644318 Length:497 Species:Mus musculus


Alignment Length:459 Identity:130/459 - (28%)
Similarity:208/459 - (45%) Gaps:44/459 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |.:..||......:|::..|.:|.|.||||.|..|:.....|     .|::.:|:..||:|:.|.
Mouse    28 YTVLKTLSQHGTTEVRLCSHHLTGVTVAVKALKYQRWWEPKV-----SEVEIMKMLSHPNIVSLL 87

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            |||.|..:|::|||...|.:|.:.:.:...|:|.:||..|.|::|.:.|||...:|||||||:|:
Mouse    88 QVIETEQNIYLIMEVAQGTQLHNRVQEARCLKEDEARSIFVQLLSAIGYCHGEGVVHRDLKPDNV 152

  Fly   158 LLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCG 222
            ::|.:.:|||.||||....:.|:.|...||:..:..||:..|..|.||:||||:.||:||.::.|
Mouse   153 IVDEHGNVKIVDFGLGARFMPGQKLERLCGAFQFIPPEIFLGLPYDGPKVDIWALGVLLYYMVTG 217

  Fly   223 TLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAY 287
            ..||....:..:.:::..|.:.||..|:|.:.:::..:|..:..:|...:::..|.|.|:.....
Mouse   218 IFPFVGSTLSEISKEVLQGRYEIPYNLSKDLRSMIGLLLATNARQRPTAQDLLSHPWLQEGEKTI 282

  Fly   288 LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPH---DQLAIAYHLIIDNKRFADDA 349
            .|.|:  .|::..|...:|.: ...|....::..||    .|   |:....|:|:  ......|.
Mouse   283 TFHSN--GDTSFPDPDIMAAM-KNIGFHVQDIRESL----KHRKFDETMATYNLL--RAEACQDD 338

  Fly   350 ANQINEINNFFVAGSPPPPPP--------PPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPV 406
            .|.:.  ......|.||.|..        ||..::|......|.:.|.......:.||..|.||.
Mouse   339 GNYVQ--TKLMNPGMPPFPSVTDSGAFSLPPRRRASEPSFKVLVSSTEEHQLRQTGGTNAPFPPK 401

  Fly   407 AGGTPSSTIPIRPHPERIAP-----------MRDRQLAMSVQTSGGGAFPEK----TARGGTPIK 456
            .  ||:.....:......||           ..|.....|.|.....:.|||    |:...||..
Mouse   402 K--TPTMGRSQKQKRAMTAPCICLLRNTYIDTEDSSFCTSSQAEKTSSDPEKSETSTSCPLTPRG 464

  Fly   457 RAKW 460
            ..||
Mouse   465 WRKW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 85/251 (34%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/65 (17%)
AMPKA_C 457..580 CDD:213378 2/4 (50%)
Gm4922NP_808374.1 STKc_AMPK-like 27..274 CDD:270905 85/250 (34%)
UBA_MARK_Par1 293..330 CDD:270522 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..410 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..460 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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