DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Smok2b

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001161385.1 Gene:Smok2b / 236574 MGIID:3037705 Length:484 Species:Mus musculus


Alignment Length:473 Identity:128/473 - (27%)
Similarity:220/473 - (46%) Gaps:57/473 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |::..|:|.|...||.:..|::|...||||::.    ||......:..|::.|.:..||:||.|.
Mouse     8 YVMLETIGHGGCSKVMLARHRLTGSHVAVKMIR----KSECWCNPVMSEVELLMMADHPNIISLL 68

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            |||.|...:::|||...|..|:.:|...|.|||.:||..|:|::|.::|||...||||||||:|:
Mouse    69 QVIETKKKVYLIMELCEGKSLYQHIRNAGYLQEDEARALFKQLLSAMNYCHNQGIVHRDLKPDNI 133

  Fly   158 LLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCG 222
            :::.:..|||.||||...:..|:.|...||:..::||||:..:.|.||::|:|:.||:||.::.|
Mouse   134 MVEKDGKVKIIDFGLGTQVKPGQKLNLFCGTYPFSAPEVLLSRPYDGPKIDVWTLGVVLYFMVTG 198

  Fly   223 TLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAY 287
            .:|||...:..|.|:|.:|.:.:|..|:.::.:|:..::..:|..|..:.|:..|.|..:.  :.
Mouse   199 KVPFDAASIQKLVRQILAGKYFVPSRLSVELRDLISLLMTANPKLRPTVAEVMVHPWVTEG--SG 261

  Fly   288 LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQ 352
            :||...|:...:....|:.:.....|.:..::.:||.....::.:| :|.|:  .|:...:....
Mouse   262 VFPDPCEEQMPLKPNPAIVKAMGYIGFQAQDIEDSLRQRKFNETMA-SYCLL--KKQILKECDRP 323

  Fly   353 INEINNFFVAGSPPPPPPPPVPQ------------------SSMDHQAPLATVTVGGGTSASSGT 399
            |.        ..|..|...|.|.                  :|:...|.......|..||.....
Mouse   324 IR--------AQPMNPSVTPFPSLVDTSTFHLGLRRRETEPTSLRLSANRQMSVCGRSTSKKRDR 380

  Fly   400 ATPVPPVAGGTPSSTIPIRPHPERIAPMRDR------QLAMSVQTSGGGAFPEKTARGGT----- 453
            ....|.|: |.|..|.....|..    .|.|      .:..::|.:..    :.:..|.|     
Mouse   381 RFSWPSVS-GRPLHTTHTMDHTH----TRTRSVPCIYSMFCTIQPNSS----DDSTEGHTSASAE 436

  Fly   454 --PIKRAKWHLGIRSQSK 469
              |::...|..||:..::
Mouse   437 DKPVRSRGWPRGIKGWTR 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 91/251 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521 9/62 (15%)
AMPKA_C 457..580 CDD:213378 3/13 (23%)
Smok2bNP_001161385.1 STKc_AMPK-like 7..255 CDD:270905 91/250 (36%)
UBA_MARK_Par1 275..314 CDD:270522 7/41 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..400 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..450 5/31 (16%)

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