DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Trib3

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_780302.2 Gene:Trib3 / 228775 MGIID:1345675 Length:354 Species:Mus musculus


Alignment Length:209 Identity:61/209 - (29%)
Similarity:102/209 - (48%) Gaps:9/209 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 KLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRH 145
            :|..|.|:.:..:|: ..|.:..|....:.|:|...:.....:.|.:|...|:|:.|.|.:||:|
Mouse   113 RLPTHQHVARPTEVL-LGSRLLYIFFTKTHGDLHSLVRSRRGIPESEAAGLFRQMASAVAHCHKH 176

  Fly   146 MIVHRDLKPENLLLDHNMHVKIADFGLSNMML-----DGEFLRTSCGSPNYAAPEVISGK-LYAG 204
            .:|.||||....:..:....|:....|.:..:     |..:.:.:|  |.|..||::|.: .|:|
Mouse   177 GLVLRDLKLRRFVFSNCERTKLVLENLEDACVMTGSDDSLWDKHAC--PAYVGPEILSSRPSYSG 239

  Fly   205 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRA 269
            ...|:||.||.|:.:|.|..||.|.....||.||:.|.|.:||.|:.....|:..:|:.:|.:|.
Mouse   240 KAADVWSLGVALFTMLAGRYPFHDSEPVLLFGKIRRGTFALPEGLSAPARCLIRCLLRKEPSERL 304

  Fly   270 NIEEIKKHEWFQKD 283
            ....|..|.|.::|
Mouse   305 VALGILLHPWLRED 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 59/204 (29%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Trib3NP_780302.2 Interaction with DDIT3/CHOP. /evidence=ECO:0000250 1..127 3/13 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..61
Protein Kinases, catalytic domain 74..315 CDD:473864 59/204 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..354
Blue background indicates that the domain is not in the aligned region.

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