DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Trib2

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_653134.2 Gene:Trib2 / 217410 MGIID:2145021 Length:343 Species:Mus musculus


Alignment Length:354 Identity:92/354 - (25%)
Similarity:140/354 - (39%) Gaps:89/354 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 HQITRVKVAVKILNRQKIKSLDVVGKIRR-----------------EIQNLK------------- 81
            |:.|.:.:|....:|.|.:..:.:..||.                 |..||.             
Mouse     4 HRSTPITIARYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPSPPETPNLSHCVSCIGKYLLLE 68

  Fly    82 ------LFRHPHI------------IKLYQ-------VISTPSDIFMIMEYVSG----------- 110
                  :||..|:            |..||       .:|..|:|..|.|.:.|           
Mouse    69 PLEGDHVFRAVHLHSGEELVCKVFEISCYQESLAPCFCLSAHSNINQITEILLGETKAYVFFERS 133

  Fly   111 -GELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSN 174
             |::..::....||:|.:|.|.|.||.|.|.:||...:|.||||....:.......::....|.:
Mouse   134 YGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGGLVLRDLKLRKFIFKDEERTRVKLESLED 198

  Fly   175 MML---DGEFLRTSCGSPNYAAPEVI--SGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 234
            ..:   |.:.|....|.|.|.:||::  ||. |:|...|:||.||:||.:|.|..||.|....:|
Mouse   199 AYILRGDDDSLSDKHGCPAYVSPEILNTSGS-YSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSL 262

  Fly   235 FRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAYLFPSSIEQDSNV 299
            |.||:.|.|.|||.|:.:...|:..:|:.:|.:|...:||..|.||..|...          || 
Mouse   263 FSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQEILDHPWFSTDFSV----------SN- 316

  Fly   300 IDTYAVAEVCTKFGVKETEVHNSLLSGDP 328
             ..:...|.|.:. |.:..:..:|   ||
Mouse   317 -SGFGAKEACDQL-VPDVNMEENL---DP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 81/304 (27%)
UBA_AID_AMPKalpha 297..360 CDD:270521 8/32 (25%)
AMPKA_C 457..580 CDD:213378
Trib2NP_653134.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..50 2/24 (8%)
PK_TRB2 67..308 CDD:270924 71/241 (29%)
Blue background indicates that the domain is not in the aligned region.

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