DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and K02E10.7

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001360081.1 Gene:K02E10.7 / 186892 WormBaseID:WBGene00019321 Length:609 Species:Caenorhabditis elegans


Alignment Length:342 Identity:85/342 - (24%)
Similarity:153/342 - (44%) Gaps:22/342 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP 98
            :.:|.||.|.:|....:.::||:|..:.....::.........:|.:....||.|::.:.|....
 Worm    56 IASGRFGTVFLGTITDSMLQVAIKEYHETFHDAVLTAHDEGSTLQKIISIEHPAIVQTFSVSHFQ 120

  Fly    99 SDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNM 163
            ..::.:||:.| ..|.|.|:..||..|.|.:....|....::|.|...:.|..|..:|:.|..||
 Worm   121 DIVYKVMEFHS-WTLHDDILDKGKYDESQTKLVLVQATRALEYLHAQNLCHGTLHTKNIFLQENM 184

  Fly   164 HVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDD 228
             |||:|...|..:....|.:|......:.|||:.:.......|.|:||.||.::.:..|:.||..
 Worm   185 -VKISDIESSQFLNWLPFSQTPLHILPFIAPELHNQLSEVTSECDLWSLGVCIFVMATGSCPFIL 248

  Fly   229 EHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAYLFPSSI 293
            |...|:...|::||...|...:.::.:||.|::.|:|.:|.:::.:.:.:|...||....|.|..
 Worm   249 ESRNTMMESIQAGILGSPVLASDKIQSLVEQLIHVNPSERMSLKSLIEDDWMTSDLVWNYFISCH 313

  Fly   294 E---QDSNVIDTYAVAEVCTKFGVK--------ET--EVHNSLLSGDPHDQLAIAYHLIID---- 341
            |   ::..|:|.:..||...|..|:        ||  |.:.|:.|..|.:........::.    
 Worm   314 EDLIRELPVVDRFIPAESLEKSTVQRDGSEISIETLDEGYKSVASDHPEEPAVSGEQQVLTEPVP 378

  Fly   342 ---NKRFADDAANQINE 355
               :|:||..|...:.:
 Worm   379 KKYHKKFAVFAMENVRK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 63/245 (26%)
UBA_AID_AMPKalpha 297..360 CDD:270521 16/76 (21%)
AMPKA_C 457..580 CDD:213378
K02E10.7NP_001360081.1 S_TKc 52..300 CDD:214567 63/245 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.