DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and sad-1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001076760.1 Gene:sad-1 / 181471 WormBaseID:WBGene00004719 Length:914 Species:Caenorhabditis elegans


Alignment Length:590 Identity:202/590 - (34%)
Similarity:294/590 - (49%) Gaps:116/590 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIK 90
            |.|.|..|||.|..|.||.|.|.||..|||:||:|::|: |..|:.|:.|||..:||..|||::.
 Worm    45 GPYKLEKTLGKGQTGLVKTGTHCITGRKVAIKIVNKEKL-SESVLQKVEREIAIMKLIEHPHVLH 108

  Fly    91 LYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPE 155
            ||.|......:::::|:|||||||||:|:.|:|...:||:||:||||.:|:||.|.|.|||||||
 Worm   109 LYDVYENKKYLYLLLEHVSGGELFDYLVRKGRLMSKEARKFFRQIISALDFCHAHNICHRDLKPE 173

  Fly   156 NLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALL 220
            |||||...::|:||||::::.::|..|.||||||:||.||||.|:.|.|.:.|:|||||||||||
 Worm   174 NLLLDERNNIKVADFGMASLQVEGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYALL 238

  Fly   221 CGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWF----- 280
            .|.|||||:::..|..|:|.|:|.||.::...|.:|:..|::|||.||.::.::.||.|.     
 Worm   239 VGALPFDDDNLRNLLEKVKRGVFHIPHFVPADVQSLLRAMIEVDPGKRYSLADVFKHPWVSGTTK 303

  Fly   281 ---QKDLP------AYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAY 336
               :.:||      .::.|.....|.:|: .:.....|.|   .:.::.|.||| ..|:...:.|
 Worm   304 ADPELELPMSQVVQTHVIPGEDSIDPDVL-RHMNCLGCFK---DKQKLINELLS-PKHNTEKMVY 363

  Fly   337 HLIIDNKR----FADD------AANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGG 391
            .|::|.||    ..||      .|.|.|:             ||.....||...:.|:.::..|.
 Worm   364 FLLLDRKRRRPAQEDDTEIVLRGAAQNND-------------PPKKRTDSSRTSRYPMGSIADGS 415

  Fly   392 --------GTSASSGTATPVPPVAGGTP-----SSTIPIRPHPERIAPMRDRQLAMSVQTSGGGA 443
                    |.:..||..:.:    ||:|     |||               |.|..|   |..|:
 Worm   416 PINPRKTYGRNQKSGRHSSL----GGSPTESPRSST---------------RDLFGS---SSSGS 458

  Fly   444 FPEKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPY-------HVR---V 498
            :   :||.|....|.      ||.|          |:..:..|..:.::|.       |||   .
 Worm   459 Y---SARAGEDRDRG------RSAS----------RSTNSYHYYTQPVDPQTLAEAARHVRDAQE 504

  Fly   499 RRQNVKTGKFS--KMSLQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLSVSGVMPLQP 561
            ||::..:|:.|  |.|.......|.|     .|..||  ......:....:||.:....|:....
 Worm   505 RRESRDSGRGSSRKESKDRSDKSASS-----SSCKND--ASSTSSVPHKYSPPSVMSESVVVSSS 562

  Fly   562 TGHHT 566
            |.:.|
 Worm   563 TMNST 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 130/253 (51%)
UBA_AID_AMPKalpha 297..360 CDD:270521 18/72 (25%)
AMPKA_C 457..580 CDD:213378 26/122 (21%)
sad-1NP_001076760.1 STKc_BRSK1_2 45..298 CDD:270983 130/253 (51%)
UBA_BRSK 327..379 CDD:270525 14/56 (25%)

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