DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and ZK524.4

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_492097.1 Gene:ZK524.4 / 172500 WormBaseID:WBGene00013994 Length:1016 Species:Caenorhabditis elegans


Alignment Length:361 Identity:128/361 - (35%)
Similarity:192/361 - (53%) Gaps:33/361 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIK 90
            |.|.|..|:|.|.|..||:.:|..|...|||||:::.|:.... ..:|.:|::.:||.:|.:|::
 Worm    25 GLYDLEKTIGQGHFAVVKLAKHVFTGEMVAVKIIDKTKMDEAS-TSQIMKEVRCMKLVQHANIVR 88

  Fly    91 LYQVISTPSDIFMIMEYVSGGELFDYIVKHGK-LQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            ||:|:.|.:.||:|:| :...:|.|:|:||.| :.|..|:::|.||::.:||||:..:|||||||
 Worm    89 LYEVLDTQTKIFLILE-LGDYDLHDFIIKHEKGVCESLAQQYFCQIMTAIDYCHQLHVVHRDLKP 152

  Fly   155 ENLLLDHNM-HVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYA 218
            ||::....: .||:.|||.||....||.|.|||||..|:|||::.|..|..|.||:||.|||||.
 Worm   153 ENVVFFEKLGMVKLTDFGFSNSYEPGEQLNTSCGSLAYSAPEILLGDSYDAPAVDVWSLGVILYM 217

  Fly   219 LLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQ-- 281
            |:||.|||.:.:......||....:.||:.|:.:..||:..||..:|.|||::|:|....|.|  
 Worm   218 LVCGRLPFQEANDSETLTKILDCKYSIPDVLSDECRNLIQSMLVREPQKRASLEKIVSTSWVQAG 282

  Fly   282 -------------KDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLA 333
                         ..||.....:.|||  .|....|..|...:|           |..|.::.:.
 Worm   283 DRGLSTAIPLIVRHHLPTSAHATIIEQ--MVAGAIASEEDILRF-----------LENDEYNSVT 334

  Fly   334 IAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPP 369
            ..|:|:.: :..|.....|..|:....|.....|.|
 Worm   335 ATYYLLAE-RVLASYREEQARELLAKHVEWDDRPDP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 107/255 (42%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/62 (18%)
AMPKA_C 457..580 CDD:213378
ZK524.4NP_492097.1 STKc_SNRK 23..279 CDD:270976 107/255 (42%)
UBA_SNRK 296..343 CDD:270524 13/60 (22%)
Blue background indicates that the domain is not in the aligned region.

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