DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Snrk

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_321330.6 Gene:Snrk / 1281422 VectorBaseID:AGAMI1_007528 Length:1220 Species:Anopheles gambiae


Alignment Length:347 Identity:122/347 - (35%)
Similarity:194/347 - (55%) Gaps:27/347 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AVAAGSANGQPLVKI-GHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGK-- 72
            |..||..:|    || |.|.|..|||:|.|..||:..|..|..|||||::.:.|   ||.:.:  
Mosquito    11 ASRAGVYDG----KIAGLYDLEETLGSGHFAVVKLARHVFTGEKVAVKVIEKTK---LDEISRAH 68

  Fly    73 IRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGK-LQEHQARRFFQQII 136
            :.:|::.:||.:||::::||:||.|.:.:::|:|...||:|:|||::|.| |.|:.||.:|:||:
Mosquito    69 LFQEVRCMKLVQHPNVVRLYEVIDTQTKLYLILELGDGGDLYDYIMRHEKGLSENVAREYFRQIV 133

  Fly   137 SGVDYCHRHMIVHRDLKPENLLLDHNMH-VKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGK 200
            ..:.|||:..:|||||||||::....:. ||:.|||.||....|:.|.|||||..|:|||::.|.
Mosquito   134 RAISYCHQLHVVHRDLKPENVVFFEKLGVVKLTDFGFSNKFCPGQKLETSCGSLAYSAPEILLGD 198

  Fly   201 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDP 265
            .|..|.||:||.||||:.|:||..||.:.:.......|....:.:|.:::....||:.:||..:|
Mosquito   199 SYDAPAVDVWSLGVILFMLVCGHPPFQEANDSETLTMIMDCKYTMPAHVSDGCRNLISKMLVREP 263

  Fly   266 LKRANIEEIKKHEWFQ--------KDLPAYLFPSSIEQDSN-VIDTYAVAEVCTKFGVKETEVHN 321
            .|||.:::|....|..        ::.|........|:|.. :|......::.||..:.|.    
Mosquito   264 EKRATLQQIALDVWLMEGSCEETPENQPLVSREQVSEEDHTLIIQKMINGKIATKEEILEA---- 324

  Fly   322 SLLSGDPHDQLAIAYHLIIDNK 343
              |..:.::.:...|.|:.:.|
Mosquito   325 --LDRNEYNHITATYFLLAERK 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 105/259 (41%)
UBA_AID_AMPKalpha 297..360 CDD:270521 8/48 (17%)
AMPKA_C 457..580 CDD:213378
SnrkXP_321330.6 None
Blue background indicates that the domain is not in the aligned region.

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