DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and LOC1278093

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_061510184.1 Gene:LOC1278093 / 1278093 VectorBaseID:AGAMI1_002468 Length:693 Species:Anopheles gambiae


Alignment Length:300 Identity:109/300 - (36%)
Similarity:170/300 - (56%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AEAVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKI--KSLDVVG 71
            ::.||.|.       :||.|.....:|.|.|.:||:..||:|:.|||:|:::..::  |:|.:  
Mosquito    32 SQEVALGR-------RIGLYRFCGDIGRGNFSRVKLAVHQLTKDKVAIKVVDTSRLDAKALRM-- 87

  Fly    72 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQII 136
             :.||:..|:...||.|::|::||.|...|.:|.|:|.||||::.|.:.|.|:|..|...|||::
Mosquito    88 -LSREVSTLECVYHPFILRLFEVIETLGKIHLISEWVQGGELYNRITEVGPLKEPHAALLFQQLL 151

  Fly   137 SGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDG--EFLRTSCGSPNYAAPEVISG 199
            ..|.:.|....||||:|.||:||.....:|:||||.|..:::|  :.|.|.||||.|||||:.|.
Mosquito   152 LAVKHLHSLGFVHRDIKAENVLLVSEERIKLADFGFSTQLVNGPWQHLDTFCGSPPYAAPELFSD 216

  Fly   200 KLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVD 264
            ..|.|..||||:.|::||.:|.|::||....||.|...:..|.|.|...|:.....::.::|...
Mosquito   217 DHYIGGPVDIWALGILLYFMLEGSMPFKAPTVPLLRTAVLKGEFVISTSLSVPCCRVIQRILVHT 281

  Fly   265 PLKRANIEEIKKHEWFQ--KDLPAYLFPSSIEQDSNVIDT 302
            |.:|..||::...:||:  :|....|..||.:..:.|..|
Mosquito   282 PSRRPTIEQLLDCQWFRYAQDHAGRLGRSSNQPQTTVGQT 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 98/258 (38%)
UBA_AID_AMPKalpha 297..360 CDD:270521 1/5 (20%)
AMPKA_C 457..580 CDD:213378
LOC1278093XP_061510184.1 None
Blue background indicates that the domain is not in the aligned region.

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