DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and LOC1275588

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_314849.3 Gene:LOC1275588 / 1275588 VectorBaseID:AGAMI1_008601 Length:323 Species:Anopheles gambiae


Alignment Length:259 Identity:93/259 - (35%)
Similarity:146/259 - (56%) Gaps:8/259 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |::|..:|.||:..||.......:..||:||:::.......:...:.||:..::..||.:||..|
Mosquito    30 YIVGDVIGQGTYAVVKKAYWTKFKRTVAIKIMSKTNAGETFLQKCLPRELDAIRNLRHENIIHYY 94

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            :||.|...:::.|.|...|.|...|.|.|.|.|.:|||:::|:::.::|.|.....|||:|.||:
Mosquito    95 EVIETTMRVYISMRYAEHGTLLSLIRKQGHLPEVRARRYYRQLLAALEYIHTAGYAHRDIKLENM 159

  Fly   158 LLDHNMHVKIADFGLS--NMMLDGEFL-RTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            :||.|..:|:.|||.:  ..::|...| :|.|||..||:||::..|.|.....|||:.||:||:|
Mosquito   160 VLDGNDRLKLIDFGFACRARVVDAPVLSKTFCGSHAYASPELLRFKPYDPVHADIWASGVVLYSL 224

  Fly   220 LCGTLPFDDE-HVPTLFRKIKSG-IFPIPEYLNKQVVNLVCQM-LQVDPLKRANIEEIKKHEWF 280
            |.|.|||.:| .|..|.:||..| |||....:.::|..|:.|: |.|:  ||....|:.:..||
Mosquito   225 LYGKLPFSNEKQVNLLLQKINRGVIFPSSITVTREVQCLLKQLFLPVE--KRITWPELGRSLWF 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 91/257 (35%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
LOC1275588XP_314849.3 None
Blue background indicates that the domain is not in the aligned region.

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