DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Chek1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_031717.2 Gene:Chek1 / 12649 MGIID:1202065 Length:476 Species:Mus musculus


Alignment Length:556 Identity:139/556 - (25%)
Similarity:218/556 - (39%) Gaps:171/556 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST 97
            |||.|.:|:|::..::||...|||||::.:  :::|....|::||...|:..|.:::|.|.....
Mouse    14 TLGEGAYGEVQLAVNRITEEAVAVKIVDMK--RAIDCPENIKKEICINKMLSHENVVKFYGHRRE 76

  Fly    98 PSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHN 162
            ....::.:||.|||||||.|.....:.|..|:|||.|:::||.|.|...|.|||:||||||||..
Mouse    77 GHIQYLFLEYCSGGELFDRIEPDIGMPEQDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141

  Fly   163 MHVKIADFGLSNMMLDG---EFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTL 224
            .::||:||||:.:....   ..|...||:..|.|||::..|.:....||:||||::|.|:|.|.|
Mouse   142 DNLKISDFGLATVFRHNNRERLLNKMCGTLPYVAPELLKRKEFHAEPVDVWSCGIVLTAMLAGEL 206

  Fly   225 PFD------DEHVPTLFRKIKSGIFPIPEYLN--KQV----VNLVCQMLQVDPLKRANIEEIKKH 277
            |:|      .|:.....:|         .|||  |::    :.|:.::|...|..|..|.:|||.
Mouse   207 PWDQPSDSCQEYSDWKEKK---------TYLNPWKKIDSAPLALLHKILVETPSARITIPDIKKD 262

  Fly   278 EWFQKDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDN 342
            .|:.|.|                                                         |
Mouse   263 RWY
NKPL---------------------------------------------------------N 270

  Fly   343 KRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPV---- 403
            :                   |:..|                  ..|.||.:.:|||.:..:    
Mouse   271 R-------------------GAKRP------------------RATSGGMSESSSGFSKHIHSNL 298

  Fly   404 --PPVAGGTPSSTIPI---RPHPERIAPMRDRQLAMSVQTSG---------GGAFPEKTARG--- 451
              .||..|:...|:..   :|.|         :..:|:..:|         |.:|.:.|...   
Mouse   299 DFSPVNNGSSEETVKFSSSQPEP---------RTGLSLWDTGPSNVDKLVQGISFSQPTCPEHML 354

  Fly   452 ------GTP----------IKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRR 500
                  |||          :||...........|....:.|.:   :.|.|:||......|.|..
Mouse   355 VNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETF---EKLGYQWKKSCMNQVTVST 416

  Fly   501 QNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVE 536
            .:.:..|.. ..:.|.::|.| .|:||:....|.:|
Mouse   417 TDRRNNKLI-FKINLVEMDEK-ILVDFRLSKGDGLE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 94/261 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521 1/62 (2%)
AMPKA_C 457..580 CDD:213378 18/80 (23%)
Chek1NP_031717.2 Interaction with CLSPN. /evidence=ECO:0000250 1..265 94/261 (36%)
STKc_Chk1 7..265 CDD:270971 94/261 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..331 18/166 (11%)
Autoinhibitory region. /evidence=ECO:0000250 391..476 16/65 (25%)

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