DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CHEK1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_011540862.1 Gene:CHEK1 / 1111 HGNCID:1925 Length:492 Species:Homo sapiens


Alignment Length:440 Identity:111/440 - (25%)
Similarity:170/440 - (38%) Gaps:117/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDG---EFLRT 184
            :.|..|:|||.|:::||.|.|...|.|||:||||||||...::||:||||:.:....   ..|..
Human   118 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 182

  Fly   185 SCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFD------DEHVPTLFRKIKSGIF 243
            .||:..|.|||::..:.:....||:||||::|.|:|.|.||:|      .|:.....:|      
Human   183 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------ 241

  Fly   244 PIPEYLN--KQV----VNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAYLFPSSIEQDSNVIDT 302
               .|||  |::    :.|:.::|..:|..|..|.:|||..|:.|.|                  
Human   242 ---TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY
NKPL------------------ 285

  Fly   303 YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPP 367
                    |.|.|...|.:..:|..|.   ..:.| |..|..|:  ..|..:...|...:.|.|.
Human   286 --------KKGAKRPRVTSGGVSESPS---GFSKH-IQSNLDFS--PVNSASSEENVKYSSSQPE 336

  Fly   368 PPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPSSTIPIRPHPERIAPMRDRQL 432
            |..                     |.|....:.:.:..:..|. |.:.|..|         |..|
Human   337 PRT---------------------GLSLWDTSPSYIDKLVQGI-SFSQPTCP---------DHML 370

  Fly   433 AMS--VQTSGGGAFP-----EKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMK----ALSY 486
            ..|  :.|.|....|     ::..|..|.:...|                 .|:.:|    .|.|
Human   371 LNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADK-----------------SYQCLKETCEKLGY 418

  Fly   487 EWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVE 536
            :||......|.:...:.:..|.. ..:.|.::|.| .|:||:....|.:|
Human   419 QWKKSCMNQVTISTTDRRNNKLI-FKVNLLEMDDK-ILVDFRLSKGDGLE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 62/171 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/62 (19%)
AMPKA_C 457..580 CDD:213378 17/84 (20%)
CHEK1XP_011540862.1 PKc_like <114..281 CDD:304357 62/171 (36%)
S_TKc <117..280 CDD:214567 62/170 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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