DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CHEK1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_011540862.1 Gene:CHEK1 / 1111 HGNCID:1925 Length:492 Species:Homo sapiens


Alignment Length:440 Identity:111/440 - (25%)
Similarity:170/440 - (38%) Gaps:117/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDG---EFLRT 184
            :.|..|:|||.|:::||.|.|...|.|||:||||||||...::||:||||:.:....   ..|..
Human   118 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 182

  Fly   185 SCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFD------DEHVPTLFRKIKSGIF 243
            .||:..|.|||::..:.:....||:||||::|.|:|.|.||:|      .|:.....:|      
Human   183 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------ 241

  Fly   244 PIPEYLN--KQV----VNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAYLFPSSIEQDSNVIDT 302
               .|||  |::    :.|:.::|..:|..|..|.:|||..|:.|.|                  
Human   242 ---TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY
NKPL------------------ 285

  Fly   303 YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPP 367
                    |.|.|...|.:..:|..|.   ..:.| |..|..|:  ..|..:...|...:.|.|.
Human   286 --------KKGAKRPRVTSGGVSESPS---GFSKH-IQSNLDFS--PVNSASSEENVKYSSSQPE 336

  Fly   368 PPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPSSTIPIRPHPERIAPMRDRQL 432
            |..                     |.|....:.:.:..:..|. |.:.|..|         |..|
Human   337 PRT---------------------GLSLWDTSPSYIDKLVQGI-SFSQPTCP---------DHML 370

  Fly   433 AMS--VQTSGGGAFP-----EKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMK----ALSY 486
            ..|  :.|.|....|     ::..|..|.:...|                 .|:.:|    .|.|
Human   371 LNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADK-----------------SYQCLKETCEKLGY 418

  Fly   487 EWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVE 536
            :||......|.:...:.:..|.. ..:.|.::|.| .|:||:....|.:|
Human   419 QWKKSCMNQVTISTTDRRNNKLI-FKVNLLEMDDK-ILVDFRLSKGDGLE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 62/171 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/62 (19%)
AMPKA_C 457..580 CDD:213378 17/84 (20%)
CHEK1XP_011540862.1 Protein Kinases, catalytic domain <114..281 CDD:473864 62/171 (36%)

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