DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and SIK1B

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001307572.1 Gene:SIK1B / 102724428 -ID:- Length:783 Species:Homo sapiens


Alignment Length:451 Identity:171/451 - (37%)
Similarity:249/451 - (55%) Gaps:57/451 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MRAAAAEAVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLD 68
            |...:|:....|....:|| ::|.|.:..|||.|.|..||:..|::|:.:||:||:::.::.|.:
Human     4 MSEFSADPAGQGQGQQKPL-RVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSN 67

  Fly    69 VVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQ 133
             :.||.||:|.:||..||||||||||:.|...::::.|:...||:|||:..:|.|.|::||:.|.
Human    68 -LEKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFW 131

  Fly   134 QIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVIS 198
            ||:|.|:|||.|.|||||||.||||||.||.:|:||||..|....||.|.|.||||.||||||..
Human   132 QILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFGNFYKSGEPLSTWCGSPPYAAPEVFE 196

  Fly   199 GKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQV 263
            ||.|.||::||||.||:||.|:||:||||..::|||.:::..|.|.||.::::...:|:.:||.|
Human   197 GKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLVV 261

  Fly   264 DPLKRANIEEIKKHEWFQKD--LPAYLFP--SSIEQDSNV--IDTYAVAEVCTKFGVKETEVHNS 322
            ||.:|..|.:|::|.|.:.:  ||....|  |:....||:  .|..|:. :....||.......|
Human   262 DPARRITIAQIRQHRWMRAEPCLPGPACPAFSAHSYTSNLGDYDEQALG-IMQTLGVDRQRTVES 325

  Fly   323 LLSGDPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATV 387
             |....::..|..|:|:::          ::.|..|...|  .|.|...|.|:|           
Human   326 -LQNSSYNHFAAIYYLLLE----------RLKEYRNAQCA--RPGPARQPRPRS----------- 366

  Fly   388 TVGGGTSASSGTATPVPPVAGGTPSSTIPIR-----PHPERI------APMRDRQLAMSVQ 437
                  |..||...|...:      ||.|.|     |.|:.:      |.| |.:|..|:|
Human   367 ------SDLSGLEVPQEGL------STDPFRPALLCPQPQTLVQSVLQAEM-DCELQSSLQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 126/254 (50%)
UBA_AID_AMPKalpha 297..360 CDD:270521 13/64 (20%)
AMPKA_C 457..580 CDD:213378
SIK1BNP_001307572.1 STKc_SIK 26..278 CDD:270973 125/252 (50%)
UBA_SIK1 300..349 CDD:270591 11/60 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..377 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..477
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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