DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and pim3

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002932230.2 Gene:pim3 / 100497723 XenbaseID:XB-GENE-922022 Length:323 Species:Xenopus tropicalis


Alignment Length:275 Identity:83/275 - (30%)
Similarity:136/275 - (49%) Gaps:27/275 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKL-- 82
            :|..|:  |.:|:.||:|.||.|..|......:.||||.:.::::.....:..:...::.:.|  
 Frog    34 EPFEKV--YQVGSVLGSGGFGTVYSGSRIADGLPVAVKHVAKERVTDWGTLNGVMVPLEIVLLKK 96

  Fly    83 ----FRHPHIIKLYQVISTPSDIFMIMEYVSG-GELFDYIVKHGKLQEHQARRFFQQIISGVDYC 142
                ||  .:|||...........::||.... .:|||||.:.|.|.|..||.||:|::..|.:|
 Frog    97 VGTGFR--GVIKLLDWYERADGFLIVMERPEPVKDLFDYITEKGALDEDTARGFFRQVLEAVRHC 159

  Fly   143 HRHMIVHRDLKPENLLLD-HNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPE 206
            :...:||||:|.||||:| .|..:|:.|||...::.|..:.... |:..|:.||.:....|.|..
 Frog   160 YSCGVVHRDIKDENLLVDLRNGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWVRYHRYHGRS 223

  Fly   207 VDIWSCGVILYALLCGTLPFD-DEHVPTL---FRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLK 267
            ..:||.||:||.::||.:||: ||.:..:   ||:          .::.:...|:...|.:.|..
 Frog   224 ATVWSLGVLLYDMVCGDIPFEQDEEIVRVRLYFRR----------RISAECQQLIKWCLSLRPSD 278

  Fly   268 RANIEEIKKHEWFQK 282
            |..:|:|..|.|..|
 Frog   279 RPTLEQIFDHPWMCK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 79/266 (30%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
pim3XP_002932230.2 STKc_PIM3 39..291 CDD:271004 79/266 (30%)
Blue background indicates that the domain is not in the aligned region.

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