DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and nuak1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002931675.2 Gene:nuak1 / 100491029 XenbaseID:XB-GENE-980289 Length:660 Species:Xenopus tropicalis


Alignment Length:465 Identity:154/465 - (33%)
Similarity:224/465 - (48%) Gaps:71/465 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AGSANGQPLVKIGH--------YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVV 70
            ||:...|..||..|        |.|..|||.||:||||....:.:...||:|.:.:.||:....:
 Frog    36 AGALAKQHGVKRHHHKHNLKHRYELLETLGKGTYGKVKRAIERFSGRVVAIKSIRKDKIRDEQDM 100

  Fly    71 GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQI 135
            ..|||||:.:....|||||::|:|......|.:||||.|.|||:|||.:..:|.|.:.|.||:||
 Frog   101 VHIRREIEIMSSLNHPHIIRIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQI 165

  Fly   136 ISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGK 200
            :|.|.|||::.:||||||.||:|||.|.::|||||||||:....:||:|.||||.||:||:::|:
 Frog   166 VSAVHYCHKNGVVHRDLKLENILLDENGNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGR 230

  Fly   201 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDP 265
            .|.|||||.|:.||:||.|:.||:|||......|.|:|.||.:..|.. ......|:..||.|:|
 Frog   231 PYRGPEVDSWALGVLLYTLVYGTMPFDGFDHKNLIRQISSGEYREPTQ-PSDARGLIRWMLMVNP 294

  Fly   266 LKRANIEEIKKHEWFQKDLPAYLFPSSIEQDS------NVIDTYAVAEVCTKFGVKETEVHN-SL 323
            .:||.||:|..|.|......:.:....:.:||      ..||.:      .:...::.|..| |.
 Frog   295 ERRATIEDIANHWWVNWSYKSSVCDCDVLRDSESPLLARFIDWH------NRSTTRQLEAENKSK 353

  Fly   324 LSGDPHDQLAIAYHLIIDNKRFAD------DAANQINEINNF--------------------FVA 362
            ....|.:........:..:|:.:|      |.|::.:.:...                    ::.
 Frog   354 CLSKPSEMSLEQQRSLKKSKKESDIAQSLQDGADETSSVTTSKRPKGILKKRNGDYRSHSAGYIE 418

  Fly   363 GSPPPPPPPPV------------PQSSMDHQAPLATVTVGGGTSASSGTATPVPP--VAGGTPSS 413
            |...|...|..            |.|:.|.:.|:.         ..:..|||:|.  :...||..
 Frog   419 GVVSPVLSPTYNTDDENGHIDLSPNSTQDLEVPII---------CDTKQATPMPKKGILKKTPQR 474

  Fly   414 TIPIRPHPER 423
            .......|||
 Frog   475 ESGYYSSPER 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 120/262 (46%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/95 (12%)
AMPKA_C 457..580 CDD:213378
nuak1XP_002931675.2 STKc_NUAK 56..309 CDD:270975 119/253 (47%)
Blue background indicates that the domain is not in the aligned region.

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