DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and LOC100485259

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002933099.1 Gene:LOC100485259 / 100485259 XenbaseID:XB-GENE-29077711 Length:605 Species:Xenopus tropicalis


Alignment Length:432 Identity:145/432 - (33%)
Similarity:213/432 - (49%) Gaps:63/432 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQMRAAAAEAVAAGSANGQP--LVKIGH--------YLLGATLGTGTFGKVKIGEHQITRVKVAV 56
            |...:|....:.:....|.|  .||..|        |.|..|||.||:||||....:.|...|||
 Frog    32 PMWHSADGSHIISDPGRGAPHGAVKKHHHKHSIKHRYELLETLGRGTYGKVKRATEKATGKMVAV 96

  Fly    57 KILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHG 121
            |.:.:.||........::|||:...|.:|.|||::::|..:...|.::|||.|.|||:|:|....
 Frog    97 KSIQKDKITDERDRVHLQREIEITALLQHEHIIRVFEVFESRDKIIIVMEYASNGELYDFINNKH 161

  Fly   122 KLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSC 186
            ::.|:.|||||:||:|.|.|||:..|||||:|.||:|||.|::||:|||||||.....:.|.|.|
 Frog   162 QIPENDARRFFRQIVSAVHYCHKKGIVHRDIKLENILLDDNLNVKLADFGLSNHFQKHQVLETYC 226

  Fly   187 GSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNK 251
            |||.||:||::.|..|.|||||.|:.||:||||:.|.:||::.:..:|..:|..|.:..|.:|: 
 Frog   227 GSPLYASPEIVKGLPYQGPEVDCWALGVLLYALVYGIMPFENSNYKSLAEQISRGQYREPPHLS- 290

  Fly   252 QVVNLVCQMLQVDPLKRANIEEIKKHEW----------------------------------FQK 282
            ....||..||.|:...||.||:|..|.|                                  ||.
 Frog   291 GAFGLVDWMLTVNTSSRATIEDIANHWWVNWGYDTVVCDCELAPECHSPLLARYIECQNTQGFQM 355

  Fly   283 DLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFAD 347
                    :::|...:.:......|||.:...||.::..|....|.::.:.|...::  .||.:.
 Frog   356 --------TTMEHQQDELRKEEEYEVCLRKSKKENDIIQSQQEIDLNNTIQIPKGIL--KKRSSF 410

  Fly   348 DAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTV 389
            |:|        |..:.:.....|....|.:.|.|:|....||
 Frog   411 DSA--------FLTSSNLSEERPQNCTQVNKDSQSPPLYSTV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 116/296 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/62 (19%)
AMPKA_C 457..580 CDD:213378
LOC100485259XP_002933099.1 STKc_NUAK 67..319 CDD:270975 114/252 (45%)
Blue background indicates that the domain is not in the aligned region.

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