DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and prkaa2

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001135554.1 Gene:prkaa2 / 100216099 XenbaseID:XB-GENE-5994580 Length:551 Species:Xenopus tropicalis


Alignment Length:596 Identity:359/596 - (60%)
Similarity:419/596 - (70%) Gaps:91/596 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPH 87
            ||||||:||.|||.|||||||:||||:|..||||||||||||::|||||||:|||||||||||||
 Frog    11 VKIGHYILGDTLGVGTFGKVKMGEHQLTGHKVAVKILNRQKIRNLDVVGKIKREIQNLKLFRHPH 75

  Fly    88 IIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDL 152
            |||||||||||:|.||:|||||||||||||.|||:::|.:|||.||||||.||||||||:|||||
 Frog    76 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEAEARRLFQQIISAVDYCHRHMVVHRDL 140

  Fly   153 KPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILY 217
            ||||:|||.:|:.|||||||||||.||||||||||||||||||||||:|||||||||||||||||
 Frog   141 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 205

  Fly   218 ALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK 282
            ||||||||||||||||||:||:.|:|.||||||:....|:..||||||||||.|::|::||||::
 Frog   206 ALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSAATLLMHMLQVDPLKRATIKDIREHEWFKQ 270

  Fly   283 DLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFAD 347
            |||:||||.....|:||||..||.|||.||...|:||.|||.||||.||||:||||||||:|.  
 Frog   271 DLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRI-- 333

  Fly   348 DAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPS 412
                 :|:.:.|::|.|||.                        |:.....| ..:||       
 Frog   334 -----MNQASEFYLASSPPT------------------------GSFIDEST-LHIPP------- 361

  Fly   413 STIPIRPHPERIAPM-RDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPNDIMLE 476
               .::|||||:.|: .|...|.....:.....|:..|     :|:|||||||||||||.|||.|
 Frog   362 ---GVKPHPERMPPLIADSPKARCPLDALNTTKPKPLA-----VKKAKWHLGIRSQSKPYDIMAE 418

  Fly   477 VYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQGDDV 541
            ||||||.|.:|||::||||:||||:|..||.:.||||||||||.:||||||||:        ||.
 Frog   419 VYRAMKQLDFEWKVVNPYHLRVRRKNPVTGTYVKMSLQLYQVDNRSYLLDFKSI--------DDE 475

  Fly   542 IME----SLTP-----------PPLSV------------------SGVMPL-QP-TGHHTMEFFE 571
            :||    |.||           |.||:                  ||...| .| .|.|||:|||
 Frog   476 VMEQKSGSSTPQRSCSAAGLHRPRLSIDSSTSDYSAPSGPLFGSFSGSFSLVNPRLGSHTMDFFE 540

  Fly   572 MCAALIIQLAR 582
            |||:||..|||
 Frog   541 MCASLITTLAR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 207/254 (81%)
UBA_AID_AMPKalpha 297..360 CDD:270521 35/62 (56%)
AMPKA_C 457..580 CDD:213378 82/157 (52%)
prkaa2NP_001135554.1 STKc_AMPK_alpha 13..268 CDD:270981 207/254 (81%)
UBA_AID_AAPK2 285..349 CDD:270587 40/94 (43%)
AMPKA2_C 395..549 CDD:213385 84/166 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 433 1.000 Domainoid score I577
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4551
Inparanoid 1 1.050 669 1.000 Inparanoid score I740
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275232at33208
OrthoFinder 1 1.000 - - FOG0000976
OrthoInspector 1 1.000 - - otm49018
Panther 1 1.100 - - LDO PTHR24343
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X997
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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