DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and brsk2b

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_009301700.1 Gene:brsk2b / 100149571 ZFINID:ZDB-GENE-100422-3 Length:886 Species:Danio rerio


Alignment Length:596 Identity:203/596 - (34%)
Similarity:304/596 - (51%) Gaps:122/596 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHII 89
            :|.|.|..|||.|..|.||:|.|.:|..|||:||:||:|: |..|:.|:.|||..|||..|||::
Zfish    17 VGPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVL 80

  Fly    90 KLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            ||:.|......:::::|:|||||||||:||.|:|...:||:||:||||.:|:||.|.|.||||||
Zfish    81 KLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 145

  Fly   155 ENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            ||||||...:::|||||::::.:....|.||||||:||.||||.|:.|.|.:.|:|||||||:||
Zfish   146 ENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFAL 210

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWF---- 280
            |.|.|||||:::..|..|:|.|:|.:|.::.....||:..|::||..||..:|:|:||.|:    
Zfish   211 LVGALPFDDDNLRNLLEKVKLGVFHMPHFIPPDCQNLLRGMIEVDATKRLTLEQIQKHTWYIGGK 275

  Fly   281 -----QKDLPAYL----FPSSIEQDSNVIDT-YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIA 335
                 ::.:|..:    .||:.:.|.:|::: :::.  |.:   .:.::...|||.|.:.:..| 
Zfish   276 NEPEPEQPVPRKVAIRTLPSTEDIDPDVLESMHSLG--CFR---DKNKLMKDLLSDDDNQEKMI- 334

  Fly   336 YHLIIDNK-RFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLAT------------- 386
            |.|::|.| |:..      :|..|.      ||......|:..:|  :||.|             
Zfish   335 YFLLLDRKERYPS------HEDQNL------PPRNEIDPPRKRVD--SPLLTRHNKRRPERKSME 385

  Fly   387 ---VTVGGGTSASSGTATPVP-----PVAGGTPSSTI-----------PIRPHPERIAPMRDRQL 432
               ||.||         :|||     .:|....|.::           ||....|      :|..
Zfish   386 VLSVTEGG---------SPVPVRRAIDMAQHGQSKSVFSKSLDISDANPILQSKE------ERSR 435

  Fly   433 AMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQS-----KPNDIMLEVYRAMKALSYEWKIIN 492
            ::|..:||....|..:.|   |::|    ..:..||     .||.                   :
Zfish   436 SISGASSGLSTSPLSSPR---PMRR----FAVPPQSSDLTYSPNH-------------------S 474

  Fly   493 PYHVRVRRQNVKTGKFS-KMSL---QLYQVDAKSYLLDFKSLTNDEVEQG--DDVIMESLTPPPL 551
            |.|..|.|.| .||..| |:.|   ...|::.|:..|..|....|:..|.  .:.:..|...||:
Zfish   475 PTHAPVARLN-GTGPHSPKIFLPKTAADQLNNKTQTLPAKPKVADKPLQATRSNPLPNSTPVPPV 538

  Fly   552 SVS-GVMPLQP 561
            :.| ...|.||
Zfish   539 AKSEPSTPCQP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 130/254 (51%)
UBA_AID_AMPKalpha 297..360 CDD:270521 14/64 (22%)
AMPKA_C 457..580 CDD:213378 28/117 (24%)
brsk2bXP_009301700.1 STKc_BRSK1_2 18..271 CDD:270983 130/253 (51%)
S_TKc 20..270 CDD:214567 129/250 (52%)
UBA_BRSK 298..351 CDD:270525 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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