DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and prkaa1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001120434.1 Gene:prkaa1 / 100145520 XenbaseID:XB-GENE-946195 Length:551 Species:Xenopus tropicalis


Alignment Length:600 Identity:347/600 - (57%)
Similarity:410/600 - (68%) Gaps:101/600 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPH 87
            ||||||:||.|||.|||||||:|:|::|..||||||||||||:||||||||||||||||||||||
 Frog    13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77

  Fly    88 IIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDL 152
            |||||||||||:||||:|||||||||||||.|:|||.|.::||.||||:||||||||||:|||||
 Frog    78 IIKLYQVISTPTDIFMVMEYVSGGELFDYICKNGKLDEKESRRLFQQILSGVDYCHRHMVVHRDL 142

  Fly   153 KPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILY 217
            ||||:|||.:|:.|||||||||||.||||||||||||||||||||||:|||||||||||||||||
 Frog   143 KPENVLLDAHMNAKIADFGLSNMMADGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 207

  Fly   218 ALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK 282
            |||||||||||:||||||:||..|||..|:|||..|::|:..||.|||:|||.|::|::||||:.
 Frog   208 ALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPPVISLLKHMLLVDPMKRATIKDIREHEWFKL 272

  Fly   283 DLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFAD 347
            |||.||||......||:||..|:.|||.|....|.||.:.|.|.:..|.||:||||||||:|.  
 Frog   273 DLPKYLFPEDPSYSSNMIDDEALKEVCEKCECLEEEVLSCLYSRNHQDPLAVAYHLIIDNRRI-- 335

  Fly   348 DAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPS 412
                 :||..:|::|.||        |.|.|:.                       |.||     
 Frog   336 -----MNEAKDFYLATSP--------PDSFMEE-----------------------PQVA----- 359

  Fly   413 STIPIRPHPERI------APMRDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPN 471
                 ||||||:      :| |.|.....:.       |:|| :....::||||||||||||:||
 Frog   360 -----RPHPERVPFLVAESP-RQRHTLDELN-------PQKT-KHQVGVRRAKWHLGIRSQSRPN 410

  Fly   472 DIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVE 536
            |||.||.||||.|.||||::|||::||||:|..|..::||||||||||:::|||||:|: :|||.
 Frog   411 DIMAEVCRAMKQLGYEWKVVNPYYLRVRRKNPVTSMYTKMSLQLYQVDSRTYLLDFRSI-DDEVT 474

  Fly   537 QGDDVIMESLTP----------PP----------LSVSGVMPLQPT--------------GHHTM 567
            :...   ||.||          ||          .|..|..|...|              |.||:
 Frog   475 EAKS---ESATPRRSGSISNYRPPKNDSDPEIQAKSSDGSGPSSLTSSVDSSNADLVPRPGSHTI 536

  Fly   568 EFFEMCAALIIQLAR 582
            |||||||.||..|||
 Frog   537 EFFEMCANLIKILAR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 205/254 (81%)
UBA_AID_AMPKalpha 297..360 CDD:270521 28/62 (45%)
AMPKA_C 457..580 CDD:213378 78/156 (50%)
prkaa1NP_001120434.1 STKc_AMPK_alpha 15..270 CDD:270981 205/254 (81%)
S_TKc 18..270 CDD:214567 202/251 (80%)
UBA_AID_AAPK1 287..351 CDD:270586 33/78 (42%)
AMPKA1_C 396..549 CDD:213384 78/156 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 433 1.000 Domainoid score I577
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 669 1.000 Inparanoid score I740
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275232at33208
OrthoFinder 1 1.000 - - FOG0000976
OrthoInspector 1 1.000 - - otm49018
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X997
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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