DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Gm10662

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001188293.1 Gene:Gm10662 / 100043665 MGIID:3642760 Length:313 Species:Mus musculus


Alignment Length:268 Identity:102/268 - (38%)
Similarity:152/268 - (56%) Gaps:5/268 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKL 91
            :|.:..|||.|.|..||...|..|...||||||...|    :....|.||.:.:|...||:||||
Mouse    33 NYKMLNTLGEGNFSVVKRAFHVPTSTSVAVKILQNTK----EYTSPICREARIMKSLSHPNIIKL 93

  Fly    92 YQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPEN 156
            :.|:......:::|||.|.|||.|.|:....|:|.:.||.|.||:..|.|||.|.|||||:|..|
Mouse    94 FHVVQRRETTYLVMEYASEGELLDRIINVVSLEESETRRLFAQIVHAVQYCHDHHIVHRDIKASN 158

  Fly   157 LLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLC 221
            :|:|...:.|:.||||:..::.|:.|...||:..|.|||::..:.|.|..|||||.||:|:.::.
Mouse   159 ILIDCRGNAKLCDFGLAAEVIPGQKLAGFCGTLPYCAPELLQAEKYEGLPVDIWSLGVLLFLMVS 223

  Fly   222 GTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPA 286
            |.|||.......|.::|.|..|.||.:::..:.|::.::|.::|.:|..|.:|.:|... :...|
Mouse   224 GNLPFQGRSFVDLKQEIISANFSIPSHVSIDISNVIIELLMINPSRRPTIHQIMRHPMI-RGSEA 287

  Fly   287 YLFPSSIE 294
            .|.|:|.:
Mouse   288 CLPPTSTQ 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 98/252 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Gm10662NP_001188293.1 STKc_AMPK-like 33..280 CDD:270905 97/250 (39%)
Blue background indicates that the domain is not in the aligned region.

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