DRSC/TRiP Functional Genomics Resources

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Protein Alignment chb and Togaram1

DIOPT Version :9

Sequence 1:NP_524651.2 Gene:chb / 43901 FlyBaseID:FBgn0021760 Length:1491 Species:Drosophila melanogaster
Sequence 2:XP_006516083.1 Gene:Togaram1 / 328108 MGIID:2684313 Length:1836 Species:Mus musculus


Alignment Length:1680 Identity:288/1680 - (17%)
Similarity:529/1680 - (31%) Gaps:561/1680 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSDLDGFIQQMPKADMRVKVQLAEDLVTFLS--DDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQK 68
            |.:|..  :.:.:.|.:.:.|..|:|...|.  :.:::...:.:|| |..|...|..|:||:...
Mouse   351 PQELHA--RLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHASLVGF-ISLLYNLLDDSNFKVVHG 412

  Fly    69 SLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLMEHRVLPPQALIDKLA 133
            :|:....|:.|||.....:...|:...:..|.|::..::::...:...||:.  :.||.::..|.
Mouse   413 TLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKE--VGPQRVLSLLL 475

  Fly   134 TSCFKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKH 198
            .: .|||:::||||.:...:.:|..|.::...:......:...|.|....||:||::....:...
Mouse   476 EN-LKHKHSRVREEVVNICICSLLTYPSEDFDLPKLSFDLAPALVDSKRRVRQAALEAFAVLASS 539

  Fly   199 VGDRLRPDLRRMDDVPASKLAMLEQKFDQVKQEGLLLPSALKNTNGNGVGLDEADNIGLRERPTR 263
            :|              :.|..:|.:..|.|:.:          .||:||                
Mouse   540 MG--------------SGKTNVLFKAVDTVELQ----------DNGDGV---------------- 564

  Fly   264 MIKRPLHSAVSSSLRPKPNVNDVTGDAGAVTMESFESSFEVVPQLNIFHAKDMDDIYKQVLVIIS 328
                  .:||.:.|..|                       .:|:|                    
Mouse   565 ------MNAVQARLARK-----------------------TLPRL-------------------- 580

  Fly   329 DKNADWEKRVDALKKIRALLILSYHTQPQFVAVQLKELSLSFVDILKEELRSQVIREACITIAYM 393
                                     |:..||...:...|       ..:.||..:.....|...|
Mouse   581 -------------------------TEQGFVEYAILMPS-------SAQGRSSHLAHGADTDWLM 613

  Fly   394 SKTLRNKLDAFCWSILEHLINLIQNSAKVIASAS-TIALKYIIKYTHAPKLLKIYTDT-----LN 452
            |.........:|.   :|    .::|.::..|.| ||..:.::........|....:.     .|
Mouse   614 SGNRTQSAHCYCG---DH----TRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGEN 671

  Fly   453 Q-SKSKDIRSTLCELMVLLFEE-----WQTKALERNATVLRDTLKKSIG----DADCDARRHSRY 507
            | |.||||:.|         |:     .|.:....:..:....||.|.|    |..|.:::.|..
Mouse   672 QTSNSKDIKDT---------EQIGPFSGQNQEFSAHDLIPSPKLKPSQGMPASDDLCFSKKRSSR 727

  Fly   508 AYWAFRRHFPELADQIYG---TLDIAAQRALEREREGGGGGGTGTGTGTAPETRRTVSRIGRTPG 569
            ..:...|.|...:....|   |.|:.....       |..|..|            :|:||...|
Mouse   728 NLFQSSRDFNSESVPTCGAGNTADLQTNLP-------GKCGQLG------------LSQIGCRTG 773

  Fly   570 TLQKPTPSMRSISAVDTAAAQRAKVRAQYTLYSRQRKPLGPNNSNQASMTGAAAS-GS--LPRPR 631
            ::..      .:..:.||...:.||.|.....|:.::..|..:...:|.:|:.|| ||  ||...
Mouse   774 SVGS------DLQFLGTANGHQDKVYASIDFGSKTQQTFGSQSERTSSYSGSNASPGSFILPSYP 832

  Fly   632 LNSNSGGTPATTPGSVTPRPRGRAGVS-------QSQPGSRSTSPSTKLRDQYGG--IGNYYRGA 687
            |.|.......|:|.||.|:......:|       :|..|....||..||.:|...  .|..::..
Mouse   833 LASPRTSPKHTSPLSVAPKKSQDNSISFSNSWPLKSFEGLSKPSPQKKLANQKSSDPTGENFQEK 897

  Fly   688 TGAIPKKASGIPRSTASSRETSPTR------SGGGLM-KRSMYSTGAGSRRTPERNNPVRPSAAA 745
            |.|: :....:.||.:|.|..:.|:      .|..|: .::..||....::.|:.          
Mouse   898 TTAV-QLTPALVRSPSSRRGLNGTKPVPPIPRGINLLPDKADLSTMGHMKKQPDD---------- 951

  Fly   746 RLLAQSREAEHTLGVGD--------DGQPDYVSGDYMRSGGMRMGRKLMGRDESDDIDSEASSVC 802
              :.:|.:...|:.:.:        |.:..:.|...:|:...:...||.|...:.|:||..|::.
Mouse   952 --IWKSEKDNLTIDLSELNFRDKDLDQEEMHSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMK 1014

  Fly   803 SERSFD--SSYTRGNKSNYSLSGSHTRLDWSTQRAPFDDIETIIQFCASTHWSERKDGLISLTQY 865
            .|.:.|  |..:..|.|:||.||.:::                                .|||..
Mouse  1015 LELTIDSPSRASSPNISSYSESGVYSQ--------------------------------ESLTSS 1047

  Fly   866 LADGKELTQQQLKCVLDMFRKMFMDTHTKVYSLFLDTVTELILVHANELHEWLFILLTRLFNKLG 930
            |:     |..|.|.::                                                 
Mouse  1048 LS-----TTPQGKRIM------------------------------------------------- 1058

  Fly   931 TDLLNSMHSKIWKTLQVVHEYFPTQLQLKELFRIISDSTQTPTTKTRIAILRFLTDLANTYCKSS 995
            :|:..:..||            |...:|....:....:.|:|:.......:..:....|......
Mouse  1059 SDIFPTFGSK------------PCSTRLSSAKKTSHAAEQSPSAGITTPSVSIIGQRMNYGFGCG 1111

  Fly   996 DFPSDQSQACERTVLKLAQLAADQKSMELRSQARSCLVALYNLNTPQMTLLLADLPKVYQDSARS 1060
            ||..|:|.....:.||                       :.|...|:.        |..:...||
Mouse  1112 DFEDDRSHDISPSALK-----------------------IQNKEHPRQ--------KYTKGFTRS 1145

  Fly  1061 CIHSHMRRQSQSCNSGAN----------------SPSSSPLSSSSP-------------KPLQSP 1096
               |::::.|....:..|                :|:|:|.:.|.|             ||...|
Mouse  1146 ---SNLQQISSFDFTSTNTLSEDSVVIVGKGVFGNPNSAPTTCSQPVISSVESEDTFPVKPSIEP 1207

  Fly  1097 SVGPFASLQSHHHQL------------SIS-STSPRSRQSSVEQELLFSSELDIQHNIQKTSEEI 1148
            ..|.:.....|:..|            ||: ||..:.||...|::.|..:: |.:.......|.|
Mouse  1208 PSGVYGRAVQHNAPLYPEVENDKDTKVSIAKSTYEKMRQKRKEEKELLDAK-DCERKETNPWERI 1271

  Fly  1149 RHCFGGQYQTALAPNGFNGHLQYHDQGQQDSCASLSSNSKTQSSANTTQSNTPESATMR------ 1207
            :| .|.:..|:..........||     ::..:|::.:.:...|......:.|:.|...      
Mouse  1272 KH-LGSEKMTSENEPSSGVIPQY-----KERMSSVTHSPEIMDSLELRPFSKPDIALTEALRLLA 1330

  Fly  1208 -----------------------LDNLERERTT-------QNAKSPTDDAKVITVSINMAENGEL 1242
                                   |.|.:...||       :|.:|....|.|:.:       |:|
Mouse  1331 DEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETTFAVVQEVKNLRSGVSRAAVVCL-------GDL 1388

  Fly  1243 I-LASNLMESEV---VRVAL-------TLTKDQPVELLQTSLTN------LGICIKGGNCELPNK 1290
            . .....|:.|:   ||..|       |..::...:.|:..:.|      :...|.||...|...
Mouse  1389 FTYLKKSMDQELDSAVRALLHKAGESNTFIREDVDKALKAMVNNVTPARAVTSLINGGQSHLHIA 1453

  Fly  1291 HFRSIMRMLLNILEAEHTDVVIAG--------LHVLSKIMRSNKMRHNWMHFLELILL------- 1340
            ..|...:.|.:::|....:.:.:|        |...:|..:.:.....:.....|.|:       
Mouse  1454 VRRCTAQHLADVVECMDPERISSGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFE 1518

  Fly  1341 KIIQCYQHSKEALRDIDSMIPRIAPS-----------LPLDLS---------------------- 1372
            |:::.|..||:        :|.|..|           :|||.:                      
Mouse  1519 KLLEKYIPSKD--------LPYIKESVKNLRLKGLGEIPLDTASAKGRRSHPGSVGNTRSSSVSR 1575

  Fly  1373 -------------------------------INIVNPVIATGEFPTNLCAIKILLEVTEHHGSEI 1406
                                           |.::..::...:|...:..||.||..||:: .|:
Mouse  1576 DAFSSSEREVTEVREVPRKSAPRNSLESAEYIKVITGLLNAKDFRDRINGIKQLLSDTENN-QEL 1639

  Fly  1407 TDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKLSVLNPSKV 1461
            ...::..:|........|:.|.|...|:..:.|:..:| .:.:.|.:::|.|:.|
Mouse  1640 VVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLL-RDNLSPIINMLIPAIV 1693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chbNP_524651.2 HEAT repeat 50..78 CDD:293787 8/27 (30%)
CLASP_N <74..211 CDD:289144 28/136 (21%)
HEAT repeat 90..120 CDD:293787 5/29 (17%)
HEAT_2 129..>210 CDD:290374 17/80 (21%)
HEAT repeat 131..154 CDD:293787 8/22 (36%)
HEAT repeat 165..195 CDD:293787 6/29 (21%)
CLASP_N 316..536 CDD:289144 39/238 (16%)
Togaram1XP_006516083.1 HEAT repeat 395..419 CDD:293787 7/23 (30%)
HEAT repeat 431..463 CDD:293787 4/31 (13%)
HEAT repeat 470..500 CDD:293787 9/30 (30%)
HEAT repeat 509..535 CDD:293787 6/25 (24%)
HEAT repeat 545..570 CDD:293787 9/56 (16%)
Spc7_N <799..915 CDD:373822 31/116 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848551
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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