DRSC/TRiP Functional Genomics Resources

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Protein Alignment chb and cls-2

DIOPT Version :9

Sequence 1:NP_524651.2 Gene:chb / 43901 FlyBaseID:FBgn0021760 Length:1491 Species:Drosophila melanogaster
Sequence 2:NP_001263723.1 Gene:cls-2 / 176280 WormBaseID:WBGene00000549 Length:1023 Species:Caenorhabditis elegans


Alignment Length:1225 Identity:259/1225 - (21%)
Similarity:473/1225 - (38%) Gaps:264/1225 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 GDAGAVTMESFESSFEVVPQLNIFHAKDMDDIYKQVLVIISDKNADWEKRVDALKKIRALLILSY 352
            |....|:.:.|..|||.||::.|....|..:...|.:..:|....||.||::.||:||::::   
 Worm    11 GGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVV--- 72

  Fly   353 HTQPQFVAVQLKELSLSFVDILK---EELRSQVIREACITIAYMSKTLRNKLDAFCWSILEHLIN 414
            |.:......||....:...|.|.   ::||||::|||.||..::.|.....:.......|.....
 Worm    73 HGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA 137

  Fly   415 LIQNSAKVIASASTIALKYIIKYTHAPKLLKIYTDTLNQSKSKDIRSTLCELMVLLFEEWQTKAL 479
            .:..|.||:|:...:...:|:::....::..... :.:.||.|:.|..||.|:.::.|.|..|..
 Worm   138 QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIA-SYSTSKDKNQRRQLCALLEIVLEHWNEKIK 201

  Fly   480 ERNATVLRDTLKKSIGDADCDARRHSRYAYWAFRRHFPELADQIYGTLDIAAQRALEREREGGGG 544
            ......:.:.:|.:|.|||.:.|...|.|:..........||:::.::|.:.|:.|.........
 Worm   202 RTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKMLRASDAASSS 266

  Fly   545 GGTGTGTGTAP-ETRRTVSRIG--RTPGTLQKPTPSMRSISAVDTAAAQRAKVRAQYTLYSRQRK 606
            ....:..|||| .::.:...||  |....:.....:.||.||:||....|...       |..|.
 Worm   267 TSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRMAT-------SVSRT 324

  Fly   607 PLGPNNSNQASMTGAAASGSLPRPRLNSNSGGTPATTP--GSVTPRP----RGRAGVSQSQPGSR 665
            |      |...||....|      :::::.||:....|  |::..|.    |.|..|..||||||
 Worm   325 P------NIRPMTTRTLS------KIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPTSQPGSR 377

  Fly   666 STSPSTKLRDQYGGIGNYYRGATGAIPKKASGIPRSTASSRETSPTRSGGGLMKRSMYSTGAGSR 730
            :.||                                                             
 Worm   378 NGSP------------------------------------------------------------- 381

  Fly   731 RTPERNNPVRPSAAARLLAQSREAEHTLGVGDDGQPDYVSGDYMRSGGMRMGRKLMGRDESDDID 795
                   |.||||.....|:.:..:..||          |..::.|.......||          
 Worm   382 -------PRRPSATEAFPAEMQRVKSNLG----------SNSFVSSLSAEEATKL---------- 419

  Fly   796 SEASSVCSERSFDSSYTRGNKSNYSLSGSHTRLDWSTQRAPFDD--IETIIQFCASTHWSERKDG 858
            .:|.:...|.....|  |.:...:.|....|....:.|::..|.  :|.:|:.|:||..:|:::|
 Worm   420 QKAMNTAKESLRQPS--RNDDDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREG 482

  Fly   859 LISLTQYLADGKELTQQQLKCVLDMFRKMFMDTHTKVYSLFLDTVTELILVHANELHEWLFILLT 923
            :..|...::: ..|:..::|.:..:..::..::..::   .|::::..:..|...|.:||.:.|.
 Worm   483 IKMLAGIVSE-PNLSNAEIKSLGAVLNRLLGESTNQI---VLESISSFVKTHHPRLSDWLKLGLG 543

  Fly   924 RLFNKLGTDLLNSMHSKIWKTLQVVHEYFPTQLQLKELFRIISDSTQTPTTKTRIAILRFLTDLA 988
            :||.|.|.::..:...:|..|:..:...|...||||....::.|.....:.|:|:.:|.:|.:|.
 Worm   544 KLFAKKGAEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELL 608

  Fly   989 NTYC-KSSDFPSDQSQACERTVLKLAQLAADQKSMEL-RSQARSCLVALYNLNTPQMTLLLADLP 1051
            ..|. :.|.|.:.:.:|   |:||:....|||::.:| .......|.:|:.||....:.|..|..
 Worm   609 GKYMERGSSFNTKEMKA---TILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFN 670

  Fly  1052 KVYQDSARSCIHSHMRRQ---------SQSCNSGANSPSSSPLS------SSSPKPLQSPSVGPF 1101
            ..|:|.|...:.||...|         .::|.....|.:::.:.      :....|::|||.   
 Worm   671 PDYRDWAYKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPST--- 732

  Fly  1102 ASLQSHHHQLSISSTSPRSRQSSVEQELL--FSSELDIQHNIQKTSEEIRHCFGGQYQTALAPNG 1164
                     .:|||...|     |:.|.|  .|||::.||..::.|                   
 Worm   733 ---------RAISSGFKR-----VDAEPLRPLSSEMNSQHRDEELS------------------- 764

  Fly  1165 FNGHLQYHDQGQQDSCASLSSNSKTQSSANTTQSNTPESATMRLDNLERERTTQNAKSPTDDAKV 1229
            ||           :|...|..||.|....:|::                       :|....:|:
 Worm   765 FN-----------ESFDRLKLNSTTHLIDDTSE-----------------------QSKYVASKL 795

  Fly  1230 ITVSINM-AENGELILASNLMESEVVRVALTLTKDQPVELLQTSLTNLGICIKGGNCELPNKHFR 1293
            ..:|.:| |:..|.:|:                       :||.|..       |:..|..::|.
 Worm   796 AQISGDMGAQQYEGLLS-----------------------IQTMLCE-------GSFTLWEQNFA 830

  Fly  1294 SIMRMLLNILEAEHTDV-VIAGLHVLSKIMRSNKMRHNWMHFLELILLKIIQCYQHSKEALRDI- 1356
            .::..:.::|....:|. ....|.||:|:..|...|  .....|:.:.|::....:|::...:: 
 Worm   831 KLLIAVFDVLSKSESDANKKVALRVLTKMCTSQASR--LFDSTEMAICKVLDAAVNSQDGTMNVT 893

  Fly  1357 -DSMIPRIAPSLPLDLSINIVNPVI-----ATGEFPTNLCAIKILLEVTEHHGSEITDAHLDIVF 1415
             |..:..:|..|||...:||...::     ...:.|.....:|::..:.|...::.....:|.:.
 Worm   894 ADDCLKTLATHLPLAKVVNISQLILNEYLQEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLA 958

  Fly  1416 PNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKLSVLNPSKVRLLNVYIEK 1470
            |.:.:|.|...|.|||.||:|:|.:...||.:.::|.|..|:..|:.|:.||:.:
 Worm   959 PCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNR 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chbNP_524651.2 HEAT repeat 50..78 CDD:293787
CLASP_N <74..211 CDD:289144
HEAT repeat 90..120 CDD:293787
HEAT_2 129..>210 CDD:290374
HEAT repeat 131..154 CDD:293787
HEAT repeat 165..195 CDD:293787
CLASP_N 316..536 CDD:289144 53/222 (24%)
cls-2NP_001263723.1 CLASP_N 56..257 CDD:289144 51/204 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166751
Domainoid 1 1.000 149 1.000 Domainoid score I2711
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 240 1.000 Inparanoid score I2103
Isobase 1 0.950 - 0 Normalized mean entropy S7030
OMA 1 1.010 - - QHG59940
OrthoDB 1 1.010 - - D62708at33208
OrthoFinder 1 1.000 - - FOG0001668
OrthoInspector 1 1.000 - - otm14073
orthoMCL 1 0.900 - - OOG6_102734
Panther 1 1.100 - - LDO PTHR21567
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2455
SonicParanoid 1 1.000 - - X1839
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.890

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