DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and ABCG9

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_194472.3 Gene:ABCG9 / 828850 AraportID:AT4G27420 Length:638 Species:Arabidopsis thaliana


Alignment Length:733 Identity:222/733 - (30%)
Similarity:346/733 - (47%) Gaps:146/733 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 AKSNSPASLSYHFEKSAAANQQKQHHNINICNSHHPHHHSQNQPQHSLQLTFQNL---------- 358
            ||:|...||.:...|.|                        |.|   :.|.|:||          
plant    15 AKTNDDRSLPFSIFKKA------------------------NNP---VTLKFENLVYTVKLKDSQ 52

  Fly   359 -----NVLHNERQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQ----RHIDSGSVFLNRE 414
                 |....||.||..::|.|.|.|:||::||||||||:||..|.|:    :...:|::..|.:
plant    53 GCFGKNDKTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNK 117

  Fly   415 PLTKKWRRRIGYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQT 479
            ||:|..:|..|:|.|::..:|.||:.||:|:|||||||.|..:.||::|...::..|.|..|:.|
plant   118 PLSKAVKRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGLDRCKDT 182

  Fly   480 KFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVI 544
            ..|....||:||||:||.:|..|:|.||.|:.||||||||||.:|..::.:|...|: ..:|:|.
plant   183 IIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELAR-GGRTVVT 246

  Fly   545 SVHQPSSQMFHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVT-IKPHYNPADFVLE-------Q 601
            ::|||||::|:||||||||.:|...|||...|...:|..:|.: :....||:||:|:       .
plant   247 TIHQPSSRLFYMFDKLLLLSEGNPVYFGLGSNAMDYFASVGYSPLVERINPSDFLLDIANGVGSD 311

  Fly   602 LKSHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSN 666
            ....|:..:...:|..:::                               |:|.:||....|   
plant   312 ESQRPEAMKAALVAFYKTN-------------------------------LLDSVINEVKGQ--- 342

  Fly   667 RHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWL 731
                  ::|                                     |:.....|....:...|| 
plant   343 ------DDL-------------------------------------CNKPRESSRVATNTYGDW- 363

  Fly   732 SYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLHDLQGWMFFS 796
              ||::..|||||..|..::.:....|.:...|...::.:.|.:|:|...:.  |.|..|.:||.
plant   364 --PTTWWQQFCVLLKRGLKQRRHDSFSGMKVAQIFIVSFLCGLLWWQTKISR--LQDQIGLLFFI 424

  Fly   797 QTYWMLFALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLG 861
            .::|..|.||..:.:||.||.::.|||.||.||||.|:|:::..:||:.:.|||.:|:|:|.|.|
plant   425 SSFWAFFPLFQQIFTFPQERAMLQKERSSGMYRLSPYFLSRVVGDLPMELILPTCFLVITYWMAG 489

  Fly   862 CT-SLKLFFLMLIFLLINTIVAQSVGFFIGACCMDMNVSITLSALYTLATQLFGGYLSSRIPEGL 925
            .. :|..||:.|:.||::.:|:..:|..:||..||...:.||.::..|...|.|||....:|..:
plant   490 LNHNLANFFVTLLVLLVHVLVSGGLGLALGALVMDQKSATTLGSVIMLTFLLAGGYYVQHVPVFI 554

  Fly   926 SWIRYTSMIHYAYQNMQILEFREGAAIGCGSPSSYEICKQQSTEFIPYEEILKAQNSTSPLWLNT 990
            |||:|.|:.:|.|:.:.:.::.......||...... |.....|.|      |.....|.| ::.
plant   555 SWIKYVSIGYYTYKLLILGQYTANELYPCGDNGKLR-CHVGDFEGI------KHIGFNSGL-VSA 611

  Fly   991 LILMMFFLVFRCLGYAVL 1008
            |.|....:|:|.:.|..|
plant   612 LALTAMLVVYRVIAYIAL 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 103/240 (43%)
3a01204 363..1009 CDD:273361 208/659 (32%)
ABC2_membrane 744..943 CDD:279410 68/199 (34%)
ABCG9NP_194472.3 PLN03211 19..632 CDD:215634 219/729 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 148 1.000 Domainoid score I1436
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 371 1.000 Inparanoid score I563
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.960

Return to query results.
Submit another query.