DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and ABCG4

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_194305.1 Gene:ABCG4 / 828680 AraportID:AT4G25750 Length:577 Species:Arabidopsis thaliana


Alignment Length:680 Identity:177/680 - (26%)
Similarity:309/680 - (45%) Gaps:137/680 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 SQNQPQHSLQLTFQNLNVLHNERQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHIDSG 407
            |..:|...|.||.:..:.      ||.:::....|.::|||:||||:||:||||.|:.:....||
plant    12 SYAKPLSPLLLTAEQPSF------ILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPTSG 70

  Fly   408 SVFLNREPLTKKWRRRI-GYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEAL 471
            |:.||...:.....|:| .||.|.:.|||.||:.||..::|.|.||:::.:...:  |..:|:.|
plant    71 SILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFSASLLLPKNLSKVSSV--VASLLKEL 133

  Fly   472 ELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQ 536
            .|.....|:.|    :||||||::|.:|...||.:|.::|||||||||||.||..::::||..|.
plant   134 NLTHLAHTRLG----QGLSGGERRRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIAT 194

  Fly   537 LEQKTIVISVHQPSSQMFHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLEQ 601
            ..::.:::|:||||.::..:.|::|||.:|...|.|.:..:.......|.|:....|..::.:|.
plant   195 SRERIVILSIHQPSFKILSLIDRVLLLSKGTIVYHGRLDLLEAFLLSKGFTVPSQLNSLEYAMEI 259

  Fly   602 LKSHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSN 666
            |:   :||:.           |.|.|.....|       ..:.|||              ||:  
plant   260 LQ---NIRDP-----------YENANIALPDH-------CPESKKQ--------------NQK-- 287

  Fly   667 RHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWL 731
                                     |.:|                                    
plant   288 -------------------------QSIV------------------------------------ 291

  Fly   732 SYPTSFHTQFCVLSSRNFREA-KPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLHDLQGWMFF 795
            .|.:|..|:..:||||.::.. :.|.|...|..:::.:.|:.|.|:..:...:|.:....|...|
plant   292 RYKSSRITEISLLSSRFWKIIYRTRQLLLTNILESLVVGLVLGTIYLNIGTGKEGIRKRFGLFAF 356

  Fly   796 SQTYWMLFALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPML 860
            :.|: :|.:....|..|..||.::.:|..||.||||::.||.....||.::.:..:|.:..|.::
plant   357 TLTF-LLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLV 420

  Fly   861 G-CTSLK--LFFLMLIFLLINTIVAQSVGFFIGACCMD-----MNVSITLSALYTLATQLFGGYL 917
            | |.|.:  .:|:::|::::  ::|.|...|:.:...:     .:|:|.|:|.:     ||.||.
plant   421 GLCFSWQALAYFVLVIWIIV--LMANSFVLFLSSLAPNYIAGTSSVTILLAAFF-----LFSGYF 478

  Fly   918 SSR--IPEGLSWIRYTSMIHYAYQNMQILEFR--EGAAIGCGSPSSYEICKQQSTEFIPYEEILK 978
            .|:  :|:...::.:.||..||...:.|.|:.  ....:.....:|...|.....:.:....:.:
plant   479 ISKESLPKYWLFMYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHE 543

  Fly   979 AQNSTSPLWLNTLILMMFFLVFRCLGYAVL 1008
            .|.     |.|..:|:.||:::|.|.:.||
plant   544 RQR-----WFNVYMLLGFFVLYRVLCFLVL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 85/222 (38%)
3a01204 363..1009 CDD:273361 172/660 (26%)
ABC2_membrane 744..943 CDD:279410 54/209 (26%)
ABCG4NP_194305.1 3a01204 30..572 CDD:273361 172/656 (26%)
P-loop_NTPase 30..230 CDD:304359 82/205 (40%)
ABC2_membrane 304..507 CDD:279410 54/210 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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