DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and ABCG20

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:829 Identity:202/829 - (24%)
Similarity:342/829 - (41%) Gaps:198/829 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 TAATSVASSD--SSASSSASSTSSSSSSSTSSEFTHTSQTTIPSTDNLTSSNGLANIGKSILVDA 304
            ||..||..::  .|........|.:...:.:|.|    .:::||:                  ..
plant    38 TARVSVTLAELLMSVEDEGDDQSRAMDIAVASNF----WSSVPSS------------------RV 80

  Fly   305 KSNSPASLSYHFEKSAAANQQKQHHNINICNSHHPHHHSQNQPQHSLQLTFQNLNVLHNERQILS 369
            .|:||..||:          :...:::.|.....|.....|.|       |...::..|.:.:|:
plant    81 PSSSPFVLSF----------KDLTYSVKIKKKFKPFPCCGNSP-------FDGNDMEMNTKVLLN 128

  Fly   370 DVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHIDS--GSVFLNREPLTKKWRRRI-GYVLQEE 431
            .:||.....|::|::|.|||||:||:|.|:.:...:|  |.:.||.|.|.....:.| .||:|::
plant   129 GISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDD 193

  Fly   432 IFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRGLSGGEKKR 496
            :.||.||:.||::::|..|||.|:.:.:|..:|..:::.|.|....:|..||..:||:||||::|
plant   194 LLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRR 258

  Fly   497 ANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQMFHMFDKLL 561
            .:|..:::.:|:::.||||||||||.||..::|||:|.|| ....:::|:||||.::..:.|||:
plant   259 VSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQ-SGSIVIMSIHQPSYRILGLLDKLI 322

  Fly   562 LLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLE---QLKSHPDIREKLFIAAKESHGNY 623
            .|.:|.|.|.|...::.:.|.:.|..|..:.|..:|.|:   :|:..|:..:.|.    |.|..:
plant   323 FLSRGNTVYSGSPTHLPQFFSEFGHPIPENENKPEFALDLIRELEDSPEGTKSLV----EFHKQW 383

  Fly   624 LNRNCITSSHHN-------QVSVSGAKGKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTSNG 681
            ..:...:.|..|       .:|.|.::||                                    
plant   384 RAKQTSSQSRRNTNVSLKDAISASISRGK------------------------------------ 412

  Fly   682 CRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVLSS 746
                        ||..|.:.:|:|.:.|:                         .|.|:..|:..
plant   413 ------------LVSGATNLRSSFQTFAN-------------------------PFWTEMLVIGK 440

  Fly   747 RNFREAK--PRMLSKLNWFQTIGLALMAG----AIWFQLPRTEEFLHDLQGWMFF--SQTYWMLF 803
            |:...::  |.:..     ..:|..|:.|    .|:::|..:...:.:..|:..|  |.|:   :
plant   441 RSILNSRRQPELFG-----IRLGAVLVTGMILATIFWKLDNSPRGIQERLGFFAFAMSTTF---Y 497

  Fly   804 ALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLGCTSLKLF 868
            ....|:..|..||.:..:|....|||.|:|.||.....:|.:|.|...:...::..:|.......
plant   498 TCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGSEG 562

  Fly   869 FLMLIFLLINTIVAQS--VGFFIGA---CCMDMNVSITLSALYTLATQLFGGYLSS--RIPEGLS 926
            ||...|.::....|.|  |.|..|.   ..:...|.:.:.|.:.    ||.|:..|  |||....
plant   563 FLFFFFTILTAFWAGSSFVTFLSGVVSHVMIGFTVVVAILAYFL----LFSGFFISRDRIPLYWI 623

  Fly   927 WIRYTSMIHYAYQNMQILEFRE-------GAAIGCGSP-------SSYEICKQQS---------- 967
            |..|.|::.|.|:.:...||.:       |..:...||       ....:.|..|          
plant   624 WFHYLSLVKYPYEGVLQNEFEDPTKCFVRGIQMFDNSPLGQVPTAVKISLLKSMSGVLGINVTAE 688

  Fly   968 ---TEFIPYEEILKAQNST-----SPLWLNTLILMMFFLVFRCLGYAVL 1008
               |..|   :|||.|..|     :.||:.  :...||  ||.|.|..|
plant   689 TCVTTGI---DILKQQGITEISKWNCLWIT--VAWGFF--FRVLFYFTL 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 84/224 (38%)
3a01204 363..1009 CDD:273361 182/706 (26%)
ABC2_membrane 744..943 CDD:279410 49/213 (23%)
ABCG20NP_190919.1 P-loop_NTPase 119..333 CDD:304359 83/214 (39%)
3a01204 120..738 CDD:273361 182/708 (26%)
ABC2_membrane 438..641 CDD:279410 49/214 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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