DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and ABCG29

DIOPT Version :10

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_566543.1 Gene:ABCG29 / 820881 AraportID:AT3G16340 Length:1416 Species:Arabidopsis thaliana


Alignment Length:689 Identity:186/689 - (26%)
Similarity:305/689 - (44%) Gaps:165/689 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 QTTIPSTDNLTSSNGLANIGKSILVDAKSN-----SPASLSYHFEKSAAANQQKQHHNINICNSH 337
            |..:.|.:| |..|...|..||..:|.|..     :|.::|:              .|:|     
plant   776 QQAVVSKEN-TEENRAENGSKSKSIDVKRGMVLPFTPLTMSF--------------DNVN----- 820

  Fly   338 HPHHHSQNQPQHSLQLTFQNLNVLHNERQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQR 402
                :..:.|:.     .:...|..::.|:|.:|:|...|..:.|:||.||:|||||:|.|:|::
plant   821 ----YYVDMPKE-----MKEQGVSKDKLQLLKEVTGVFRPGVLTALMGVSGAGKTTLMDVLAGRK 876

  Fly   403 ---HIDSGSVFLNREPLTKKWRRRI-GYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQ 463
               :|: |.:.::..|..::...|| ||..|.:|..||:|::|:::|:|.||||:.:.:.||||.
plant   877 TGGYIE-GDIRISGFPKRQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLPKEVTKYEKMRF 940

  Fly   464 VDHILEALELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLM 528
            ||.::|.:||...:....|.....|||..::||..||.||:.||.::.:||||||||:.:|..:|
plant   941 VDEVMELVELESLKDAVVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1005

  Fly   529 KVLKRYAQLEQKTIVISVHQPSSQMFHMFDKLLLLHQ-GRTAYFGDV-QN---IYRHFEDI-GV- 586
            :.::.... ..:|:|.::||||..:|..||:||||.: |:..|.|.: ||   |..:|:.| || 
plant  1006 RTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYAGPLGQNSHKIIEYFQAIHGVP 1069

  Fly   587 TIKPHYNPADFVLEQLKSHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSI 651
            .||..||||.::||                                    ||...|:.|.:.|  
plant  1070 KIKEKYNPATWMLE------------------------------------VSSMAAEAKLEID-- 1096

  Fly   652 LIDDIINNYYNQRSNRHHHQYENLHHTSNGCRVEE---DEEAAQHLVWCAADSQS---NFSSCAS 710
                 ...:|  :::..:.|.:||        |:|   ..:.|..|.:....|||   .|.||. 
plant  1097 -----FAEHY--KTSSLYQQNKNL--------VKELSTPPQGASDLYFSTRFSQSLLGQFKSCL- 1145

  Fly   711 SDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAI 775
                               |..:.|.:.|.       ::..|:        :|.|:..|:|.|:|
plant  1146 -------------------WKQWITYWRTP-------DYNLAR--------FFFTLAAAVMLGSI 1176

  Fly   776 WFQLPRTEEFLHDLQ---GWMFFSQTYWMLFALFGALNSFPS-------EREVVSKERRSGAYRL 830
            ::::....|..:||.   |.|:.:       .||..:|:..|       ||.|..:||.:..|..
plant  1177 FWKVGTKRENANDLTKVIGAMYAA-------VLFVGVNNSSSVQPLIAVERSVFYRERAAEMYSA 1234

  Fly   831 SAYYLAKMCAELPLVITLPTVYLMISYPMLGC--TSLKLFFLMLIFLLINTIVAQSVGFFIGACC 893
            ..|.||::..|:|.|:...|.|.:|.|.|: |  .:|..||.......::.:.....|....|..
plant  1235 LPYALAQVVCEIPYVLIQTTYYTLIIYAMM-CFEWTLAKFFWFYFVSFMSFLYFTYYGMMTVALT 1298

  Fly   894 MDMNVSITLSALYTLATQLFGGYL--SSRIPEGLSWIRY 930
            .:..|:...:..:.....||.|::  ..|||:.  ||.|
plant  1299 PNQQVAAVFAGAFYGLFNLFSGFVIPRPRIPKW--WIWY 1335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 3a01204 363..1009 CDD:273361 170/599 (28%)
ABCG29NP_566543.1 PLN03140 1..1416 CDD:215599 186/689 (27%)

Return to query results.
Submit another query.