DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and NAP12

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_001323430.1 Gene:NAP12 / 818275 AraportID:AT2G37010 Length:1082 Species:Arabidopsis thaliana


Alignment Length:849 Identity:203/849 - (23%)
Similarity:331/849 - (38%) Gaps:178/849 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 NDNETTEQV----PLVSASRRNLAKIVADCRLQI----EVEPATSAVAAAAAA------------ 228
            |.|...:.:    .::.||...|..:|.:|..|:    |...|.|..|||..|            
plant   285 NPNTANQNIHAYGAILIASLSLLMIMVYNCSDQVLATREKRQAKSREAAARHAKETTQARERWKT 349

  Fly   229 AASVASPPATSDATAATSVASSDSSASSSASSTSSSSSSSTSSEFTHTSQTTIPSTDNLTSSNGL 293
            |..||.......:...:...|...||...|:...:|..|....:........:.|.:...|:|..
plant   350 AKGVAKNQKMGLSAQLSQTFSRMKSARKDATPVKASGKSKDKKKEPSNLTKMMKSMEENPSNNEG 414

  Fly   294 ANIGKSILVDAKSNSPASLSYH------------FEKSAAANQQKQHHNINICNSHHPHHHSQNQ 346
            .|:|.......|..:|.....|            .||..|..|..::...:...|.......:.:
plant   415 FNVGTGSKPGKKPQAPKGKQLHTQSQIFKYAYGQIEKEKAMEQNNKNLTFSGVISMATDTEMRTR 479

  Fly   347 PQHSLQLTFQNLNVL--HNERQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRH--IDSG 407
            |  .:::.|::|.:.  ...:.||..|:|.:.|..|.|:|||||:||||.|..|:|:..  ..:|
plant   480 P--VIEVAFKDLTLTLKGKHKHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTRTG 542

  Fly   408 SVFLN-REPLTKKWRRRIGYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEAL 471
            .:.:| |......:::..|:|.|:::....||:.|.:.::|..||...|.:|:|:..::.::|:|
plant   543 LILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESL 607

  Fly   472 ELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQ 536
            .|...:.:..|....||:|||::||.|:..|::..|.|::|||||:||||.|:..|::.|:|.| 
plant   608 GLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREA- 671

  Fly   537 LEQKTIVISVHQPSSQMFHMFDKLLLLHQ-GRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLE 600
            ||...|.:.|||||..|:.|||.:::|.: |.|.|.|.|:.|..:|.|||:|:....||.|..::
plant   672 LEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHGSVKKIEEYFADIGITVPDRVNPPDHYID 736

  Fly   601 QL----KSHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSV-----SGAKGKKQADSI----- 651
            .|    |...||..:........|..|       ...|:.:..     |.:.|..|.||.     
plant   737 ILEGIVKPDGDITIEQLPVRWMLHNGY-------PVPHDMLKFCDGLPSSSTGSAQEDSTHNSFS 794

  Fly   652 --LIDDIINNYYNQRSNRHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCH 714
              |..|:..| .....::..|.|.|.|..||........:                        :
plant   795 NDLWQDVKTN-VEITKDQLQHNYSNSHDNSNRVTPTVGRQ------------------------Y 834

  Fly   715 SYSAGSGPGHSADDDWLSYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQL 779
            .|..|.                       :..:..|||:.:.|..|       :.|:|||....|
plant   835 RYFVGR-----------------------VGKQRLREARLQALDFL-------ILLVAGACLGTL 869

  Fly   780 PRTEEFLHDLQGWMFFSQTYWM----LFALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCA 840
            .:..:...|..|:     ||.:    |.....||.||..::....:|..:|...| |:::||...
plant   870 AKVNDETIDTLGY-----TYTIIAVSLLCKISALRSFSVDKLQYWRESAAGISSL-AHFMAKDTM 928

  Fly   841 ELPLVITLPTVYLMI-------------SYPMLGC-----TSLKLFF-----------LMLIFLL 876
            :....|..|.|||.:             :|.:|.|     |.:...|           |.::..:
plant   929 DHLNTIMKPLVYLSMFYFFNNPRSSFEDNYIVLVCLVYCVTGMAYIFAILYSPSAAQLLSVLVPV 993

  Fly   877 INTIVAQS-----VGFFIGACCMDMNVSITLSALYTLATQLFGGYLSSRIPEGLSWI--RYTSMI 934
            :.|::|..     |..::|:.|..   ..||.|......|.:.|.          |:  |.:|:.
plant   994 VMTLIANQDKESMVLKYLGSFCYP---KWTLEAFVLSNAQRYSGV----------WVVTRCSSLS 1045

  Fly   935 HYAY 938
            ...|
plant  1046 QNGY 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 81/227 (36%)
3a01204 363..1009 CDD:273361 163/636 (26%)
ABC2_membrane 744..943 CDD:279410 50/235 (21%)
NAP12NP_001323430.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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