DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E23 and abcg5

DIOPT Version :10

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_001122162.1 Gene:abcg5 / 557317 ZFINID:ZDB-GENE-050517-40 Length:652 Species:Danio rerio


Alignment Length:595 Identity:144/595 - (24%)
Similarity:259/595 - (43%) Gaps:93/595 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 RQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHIDS-----GSVFLNREPLTK-KWRRR 423
            ||||::||..:...:::.|:|.||||||||||.::|:  |.:     |.||:|...|.: :::..
Zfish    70 RQILNEVSFHLDSGQIMGILGNSGSGKTTLLDAIAGR--IGNSGNLQGEVFVNGRKLKREQFQDC 132

  Fly   424 IGYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRG 488
            ..||||.:.....||:.||:.|||.|.|.:....|.: ::|..::..|.||....:..|..:..|
Zfish   133 FSYVLQSDNLLSYLTVEETLTYTAQLALRKHSAEAIR-KKVTAVMAELSLGHVAHSVIGGRVFPG 196

  Fly   489 LSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQM 553
            :||||::|.:||.:||.:|.::||||||:||||.:|..::.:|...|: ..:.:::::|||.|::
Zfish   197 ISGGERRRVSIASQLLQDPKVILLDEPTTGLDSMTANQIVMLLAELAR-RDRIVIVTIHQPRSEL 260

  Fly   554 FHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLEQLKSHPDIREKLFIAAKE 618
            |.:|:::.::.||...:.|:...:...|...|.....:.||.|..::  .:..|.|     .::.
Zfish   261 FRIFNRIAIMSQGELVFCGEPHKMVDFFSSCGYECPEYCNPFDIYVD--LTSVDTR-----CSER 318

  Fly   619 SHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTSNGCR 683
            ....|...:.|||::.|.                                 ..|.|:.       
Zfish   319 EAATYRRMHDITSAYQNS---------------------------------EIYTNMQ------- 343

  Fly   684 VEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVLSSRN 748
             |:.|::.|.    .......|.|..|.:|.|                        :..||..|.
Zfish   344 -EKIEQSCQR----PDKPMIPFKSKESPNCIS------------------------KLGVLLRRT 379

  Fly   749 FRE-AKPRMLSKLNWFQTIGLALMAGAIWFQLPR--TEEFLHDLQGWMFFSQTYWMLFALFGALN 810
            ||. ::.||...:...|.:...|.......:|.:  |:..:.|..|.::.|........:..|:.
Zfish   380 FRNVSRDRMGILMRLSQNLIYGLFIAFFLMRLGKDVTKGAVQDRIGLIYQSMGASPYTGMLNAVA 444

  Fly   811 SFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLGCTSLKLFFLML-IF 874
            .||:.|.:..:|.:.|.|:....:||.:...||..|....::....|..:|.....:.||.. ..
Zfish   445 LFPALRAISDQESKDGLYQKWQMFLAYIIHILPFSIISVFIFASFLYWTVGMNPDPVRFLCFSAV 509

  Fly   875 LLINTIVAQSVGFFIGACCMDMNVSITLSALYTLATQLFG-GYLS--SRIPEGLSWIRYTSMIHY 936
            :::..|:.:.:...:.....|.|:..:..||..:|..:.| |:|.  .::|....|:.|.:...|
Zfish   510 VMVPHIIGELLTLVLLGVVQDPNMVNSGVALLNIAGIMVGSGFLRGFKQMPVVFQWLSYLTFQKY 574

  Fly   937 AYQNMQILEF 946
            ..:.:.:.||
Zfish   575 GCELLIVTEF 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 3a01204 363..1009 CDD:273361 144/595 (24%)
abcg5NP_001122162.1 3a01204 50..645 CDD:273361 144/595 (24%)
ABCG_White 53..279 CDD:213201 76/212 (36%)

Return to query results.
Submit another query.