DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and Abcg3

DIOPT Version :10

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:XP_038948191.1 Gene:Abcg3 / 498327 RGDID:1565568 Length:703 Species:Rattus norvegicus


Alignment Length:777 Identity:187/777 - (24%)
Similarity:327/777 - (42%) Gaps:146/777 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 SQTTIPSTDNLTSSNGLA-------NIGKSILVDAKSNSPASLSYHFEKSAAANQQKQHHNINIC 334
            |:|:||...  .|||.::       || |..|::.....|..:|.:.:.......:::|.::...
  Rat     7 SKTSIPWKG--VSSNCVSIHRSTYKNI-KPTLINPLKEEPLKMSSNNDPIVIPMAERRHSDLPET 68

  Fly   335 NSHHPHHHSQNQPQHSLQLTFQNLNV---------LHNERQI---LSDVSGFVSPCEVLAIMGPS 387
            |:..|...::     ...|:|.|::.         |..:.::   ||.:||.:.| .:.|||||.
  Rat    69 NTSDPETLTK-----EAVLSFHNISYRETVQSGFPLRQQTRVIERLSSISGIMGP-GLNAIMGPQ 127

  Fly   388 GSGKTTLLDCLSGQRHID--SGSVFLNREPLTKKWRRRIGYVLQEEIFFPQLTLRETVVYTALLR 450
            ...::.|||.|:.:|...  ||.:.:|.:|....::...|||.|.::....:|:|:.:.::|.||
  Rat   128 DGSRSLLLDVLAARRDPSGLSGDILVNGKPRPANFKCTSGYVPQNDVVMHTVTVRDNLEFSAALR 192

  Fly   451 LPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEP 515
            ||.::.|.||.|:::.:||.|.|...|.||       ..|...:||.:||.||:....::.||:|
  Rat   193 LPMTITRDEKRRRINEVLELLHLDKEQNTK-------PRSKELRKRTSIAVELIAEHPILFLDDP 250

  Fly   516 TSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQMFHMFDKLLLLHQGRTAYFGDVQNIYRH 580
            |:.||..:...::.||:|.: ::.|||:.|::||...:|..||.|.|:..|:..:.|..::...:
  Rat   251 TTDLDLTTTTYVISVLRRMS-MKGKTIIFSINQPQYSIFRFFDSLTLVASGKLMFHGPARDALEY 314

  Fly   581 FEDIGVTIKPHYNPADFVLEQLKSHPDIREKLFIAAKESH--GNYLNRNCITSSHHNQVSVSGAK 643
            |...|...:.|.|||||.|:.      |...|....::.|  |||                    
  Rat   315 FTSAGYQYESHNNPADFFLDV------INGGLCDTEEDGHEAGNY-------------------- 353

  Fly   644 GKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTSNGCRVEE-------DEEAAQHLVWCAADS 701
                      :::....|.......:...::..|:....|:::       |..:|..        
  Rat   354 ----------EELFERKYQATKKLANMYAQSRLHSDTRARLDQLLGQQQLDRNSAVE-------- 400

  Fly   702 QSNFSSCASSDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVLSSRNFR-----EAKPRMLSKLN 761
                ::|.:...|...            |::|.          |.:|.|     .||..::    
  Rat   401 ----TTCVTPFWHQLM------------WITYQ----------SFKNIRGFLLVTAKQAVI---- 435

  Fly   762 WFQTIGLALMAGAIWFQLPRTEEFLHDLQGWMFFSQTYWMLFALFGALNSFPSEREVVSKERRSG 826
               |..||.:.| |.||:.:.......::..:.:..|.:.......|...|..:|:....|..||
  Rat   436 ---TATLAALVG-IAFQILKNGCIEVYIRAGLLYLLTIFQCITSVSAGELFVIDRDRFLHEHTSG 496

  Fly   827 AYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLGC-TSLKLFFLMLIFLLINTIVAQSVGFFIG 890
            .||:|:|:..|:.|||.....||:..::|:|.:.|. ||:..||.||..:::....|.|:...||
  Rat   497 YYRVSSYFFGKLLAELIPRRLLPSTIVLITYFIAGVKTSMSSFFAMLFTVMMLAYSASSLPLSIG 561

  Fly   891 ACCMDMNVSITLSALYTLATQLFGG---YLSSRIPEGLSWIRYTSMIHYAYQNMQILEFREGAAI 952
            |....:.|......:|.:....|.|   |..|.:|: ||||:|.::.||.::.:...||     :
  Rat   562 AGENAVAVPTLFVTIYFVFMLFFSGLSLYSGSLLPQ-LSWIQYFNIPHYGFKALLHNEF-----L 620

  Fly   953 G---CGSPSSYEICKQQSTEFIPYEEILKAQN---STSPLWLNTLILMMFFLVFRCLGYAVL 1008
            |   |...:..|:.:..:......||.|..|.   |:...|.|.|.|....::...:.|..|
  Rat   621 GQNFCSEHNIEEVSRCHNYVICTGEEFLTIQGIDLSSWGFWENHLALACIMIILLTITYVQL 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 3a01204 363..1009 CDD:273361 167/675 (25%)
Abcg3XP_038948191.1 3a01204 109..683 CDD:273361 167/667 (25%)

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