DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and Abcg3l1

DIOPT Version :10

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_001004076.2 Gene:Abcg3l1 / 289453 RGDID:1303294 Length:646 Species:Rattus norvegicus


Alignment Length:698 Identity:176/698 - (25%)
Similarity:301/698 - (43%) Gaps:131/698 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 LTFQNLNV---------LHNERQI---LSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHID 405
            |:|.|::.         |..:.::   ||.:||.:.| .:.|||||....::.|||.|:.:|  |
  Rat    37 LSFHNISYRETVQSGFPLRQQTRVMERLSSISGIMGP-GLNAIMGPQDGSRSLLLDVLAARR--D 98

  Fly   406 ----SGSVFLNREPLTKKWRRRIGYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDH 466
                ||.:.:|.:|....::...||:.|.::....:|:|:.:.::|.||||.::.|.||.|:::.
  Rat    99 PCGLSGDILINGKPRPANFKCTSGYIPQNDVVLGTVTVRDNLEFSAALRLPMTVTRDEKRRRINE 163

  Fly   467 ILEALELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVL 531
            :||.|.|...|..|       ..|.|.:||.:||.||:|...::.||:||:|||..:...::.:|
  Rat   164 VLELLHLEKEQNVK-------PRSKGLRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVISIL 221

  Fly   532 KRYAQLEQKTIVISVHQPSSQMFHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPAD 596
            :|.: ::.|||:.|::||...:|..||.|.|:..|:..:.|..::...:|...|...:.|.||||
  Rat   222 RRMS-MKGKTIIFSINQPQYSIFRFFDSLTLVASGKLMFHGPARDALEYFTSAGYQYESHNNPAD 285

  Fly   597 FVLEQLK-SHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNY 660
            |.|:.:. ..||..|       :.|....|...:...|    .|:|......|.|.|        
  Rat   286 FFLDVINGGFPDTEE-------DGHEADENEEFVERQH----QVTGKLANMYAQSPL-------- 331

  Fly   661 YNQRSNRHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHS 725
                            |::...|:::          ...:.:.:.||...:.|            
  Rat   332 ----------------HSATRARLDQ----------LLGEQKLDRSSAVETTC------------ 358

  Fly   726 ADDDWLSYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIG------LALMAGAIWFQLPRTEE 784
                    .|.|..|...::.|:|:.     .....|..||.      ||::.|.. |:|  .:.
  Rat   359 --------VTPFWHQLGWITRRSFKN-----FLGFPWVTTIQVIIIVILAVVVGTA-FRL--LQN 407

  Fly   785 FLHDLQGWMFFSQTYWMLFALFGALNS------FPSEREVVSKERRSGAYRLSAYYLAKMCAEL- 842
            ...:||    ......:|...|..:.|      |..:::....|..||.||:|:|:..|:.||| 
  Rat   408 VCTELQ----MRAILILLLTGFQCITSVTAGELFVIDQDRFLHEHTSGYYRVSSYFFGKLLAELI 468

  Fly   843 PLVITLPTVYLMISYPMLGC-TSLKLFFLMLIFLLINTIVAQSVGFFIGACCMDMNVSITLSALY 906
            |..:...|::.:|:|.:.|. ||::.||.|...:::....|.|:...:||......::..|..:|
  Rat   469 PRRLLPSTIFTLITYFIAGLRTSVRGFFTMTFTIMMLAYSASSLSLSLGAGENVAAITTLLVTIY 533

  Fly   907 TLATQLFGGY-LSSRIPEGLSWIRYTSMIHYAYQNMQILEFREGAAIG---CGSPSSYEICKQQS 967
            .:....|.|. |.:.....||||||.|:.||.::.:...||     :|   |...::.|:.:.|:
  Rat   534 FVFMLFFSGLSLDTGFLPVLSWIRYFSIPHYGFRALLHNEF-----LGQNFCPEYNTEEVSRCQN 593

  Fly   968 TEFIPYEEILKAQN---STSPLWLNTLILMMFFLVFRCLGYAVLRFLR 1012
            ......||.|:.|.   |:...|.|.|.|....::...:.|..|..|:
  Rat   594 YVICTGEEFLEIQGFHLSSWGFWENHLALACTMIILLTITYVQLLLLK 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 3a01204 363..1009 CDD:273361 170/674 (25%)
Abcg3l1NP_001004076.2 3a01204 64..644 CDD:273361 172/671 (26%)

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