DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and pdr1

DIOPT Version :10

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_593995.1 Gene:pdr1 / 2543363 PomBaseID:SPAPB24D3.09C Length:1396 Species:Schizosaccharomyces pombe


Alignment Length:812 Identity:183/812 - (22%)
Similarity:315/812 - (38%) Gaps:216/812 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 STSSSSSSSTSSEFTHTSQTTIPSTDNLTSSNGLANIGKSILVDAKSNSPAS-LSYHFEKSAAAN 323
            :|:..:.:|..|.:.:.........|.|..:.|:. :|.:|.:.|.|...|: :.|..|......
pombe   648 ATAGRTGTSIVSGYQYLQVVYQYKADFLWRNCGII-LGFAIFILASSLILANFIRYDRESVHIPE 711

  Fly   324 QQKQHHNINICNSH--HPHHH--SQNQPQH-------------SLQLTFQNLN----VLHNERQI 367
            .||:.....:.:|.  .|...  ||.:|.:             :|.|.:::||    ...:::||
pombe   712 FQKRKSYSQVASSFLIEPQDKPPSQTEPDNKKVDVSTTLSTNDNLVLCWRDLNFTVVTKTSKKQI 776

  Fly   368 LSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHID---SGSVFLNREPLTKKWRRRIGYVLQ 429
            |::|||::....:.|::|.:.|||:.||..|| ||.|.   .|.:.|:.....|..|:|||||.:
pombe   777 LTNVSGYLKKNTLTALLGENKSGKSVLLRILS-QRGIAGSVEGEITLSGLKNPKNLRKRIGYVRK 840

  Fly   430 EEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRGLSGGEK 494
            ..:|..:.|:|||:...|.||..:....:|:...|:::::.|.||.......|| :.:|||...|
pombe   841 NPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGD-MGKGLSLYHK 904

  Fly   495 KRANIACELLTNP-LLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQMFHMFD 558
            :..:||.||...| .::|||||.:||||.||..|:.:|::.|: ...:|:.||.||||::..:||
pombe   905 RLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLAR-SGLSILCSVSQPSSRILELFD 968

  Fly   559 KLLLLH-QGRTAYFG----DVQNIYRHFEDIGVTIKPHYNPADFVL---EQLKSHPDIREKLFIA 615
            .:|:|. .|.|.|:.    |:..:..:|:.|..|.:...:.|||||   :.||..|:.       
pombe   969 MMLILDLNGNTVYYDTMGRDLSKLVNYFKRIHGTNEHSKDTADFVLHCIQFLKQGPEF------- 1026

  Fly   616 AKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTSN 680
                  :|......|::|            ||    :|:.:  |:                    
pombe  1027 ------DYAGAWASTNTH------------KQ----IIEHV--NF-------------------- 1047

  Fly   681 GCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDW---LSYPTSFHTQFC 742
               :.::.|.                                   .|||:   ..:.|||..|..
pombe  1048 ---IMDNPEL-----------------------------------TDDDFPNETRFMTSFFFQIY 1074

  Fly   743 VLSSRNFREAKPRMLSKLNWFQTIGLALMAG-AIWFQLPRTEEFLHDLQGWMFFSQTYWMLFALF 806
            .:|.||| .|..|..|.|.  ..:...::|| .|.|...:....:.:.|..||  ..|.:..|..
pombe  1075 KISMRNF-VAYWRDSSLLR--ARVAFNIVAGLIIGFSFYKQGVGVEETQNKMF--SAYMLTVAST 1134

  Fly   807 GALNSFPSE----REVVSK-ERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISY--------- 857
            ..:|....:    |.:..: |:.:..|..:|:.:|....|..:.....|::....|         
pombe  1135 STMNGLQPKFIYFRSIYEQYEQNTAIYSRTAFIIAFFLVEAVINCCFATLFFFGWYYPSGFYEFN 1199

  Fly   858 ---PMLGCTSLKLFFLMLIFLLINTIVAQSVGFFIGACCMDMNVSITLSALYTLATQLFGGYLSS 919
               |..|..:   :.:::||.|..|    ::|..|......:..:..:|....:..|.|.|.:  
pombe  1200 HNIPFYGGFA---WLMLMIFTLYYT----TLGIGIATISPSIGTASIISGTAFVFIQYFNGMI-- 1255

  Fly   920 RIPEGL--SWIRYTSMIHYAYQNMQILEFREGAAIG------------------------CG--- 955
            ::|..:  .|....::..|.|       |.||...|                        ||   
pombe  1256 QLPGVIVGFWKWMDALSPYKY-------FLEGMIGGVLHDAPITCEKFEIHYVDPPPNYSCGEYF 1313

  Fly   956 -------------SPSSYEICKQQSTEFIPYE 974
                         :|.:|..|     ::.||:
pombe  1314 SSFLNSSGHGIVYNPEAYSSC-----QYCPYK 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 3a01204 363..1009 CDD:273361 159/687 (23%)
pdr1NP_593995.1 3a01205 40..1382 CDD:273362 183/812 (23%)

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