DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and Abcg4

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:719 Identity:194/719 - (26%)
Similarity:318/719 - (44%) Gaps:125/719 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 PASLSYHFEKSAAANQQKQHHNINICNSHHPHHHSQNQPQHSLQLTFQNLNVLHNE--------- 364
            |..|:.|.:|......:.|..      ||.|       .:.::.:.|..|:....|         
Mouse    30 PPVLTTHLKKVENHITEAQRF------SHLP-------KRSAVDIEFVELSYSVREGPCWRKRGY 81

  Fly   365 RQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHID-SGSVFLNREPL-TKKWRRRIGYV 427
            :.:|..:||.....|::.||||||:||:|.::.|:|.|... .|.:.:|..|. .:.:|:...|:
Mouse    82 KTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVNGRPRELRTFRKMSCYI 146

  Fly   428 LQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRGLSGG 492
            :|:::..|.||:.|.::.:|.|:|.|.  :..|...|..||.||.|..|..|:     ...||||
Mouse   147 MQDDMLLPHLTVLEAMMVSANLKLSEK--QEVKKELVTEILTALGLMSCSHTR-----TALLSGG 204

  Fly   493 EKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQMFHMF 557
            ::||..||.||:.||.:|..|||||||||.|...::.::|..|. ..:|::.::||||:::|.||
Mouse   205 QRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAH-GGRTVICTIHQPSAKLFEMF 268

  Fly   558 DKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLEQLK-SHPDIREKLFIAAKESHG 621
            |||.:|.||:..:.|.|.|:..:.:.:|:....::|||||::|... .:.|:...||.|.:    
Mouse   269 DKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEYGDLNPMLFRAVQ---- 329

  Fly   622 NYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTSNGCRVEE 686
               |..|      .......:.||                                         
Mouse   330 ---NGLC------TMAEKKSSPGK----------------------------------------- 344

  Fly   687 DEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVLSSRNFRE 751
             .|...|...|..:..       ..:.|:::                 ||..||||:|..|.|..
Mouse   345 -NELPAHCPTCPPELD-------PIESHTFA-----------------TSTLTQFCILFRRTFLS 384

  Fly   752 -AKPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLHDLQGWMFFSQTYWMLFALFGALNSFPSE 815
             .:..:|:.|.:...:.:.::.|.::..:......:.:..|::|||..:.|..||...:.:||.|
Mouse   385 ILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKVFNNTGFLFFSMLFLMFAALMPTVLTFPLE 449

  Fly   816 REVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLGCTSLKLFFLMLIFLLINT- 879
            ..|..:|..:..|.|.||||||..|::|..:..|.||..|.|.|.|..:....||:...|.|.| 
Mouse   450 MAVFMREHLNYWYTLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLFSALAIATA 514

  Fly   880 IVAQSVGFFIGACCMDMNVSITLSALYTLATQLFGGYLSS--RIPEGLSWIRYTSMIHYAYQNMQ 942
            :||||:|..|||....:.|:..:..:..:...||.|:..|  .||..|.|..|.|.:.|.::.:.
Mouse   515 LVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYGFEGLI 579

  Fly   943 ILEFREGAAIGCGSPSSYEICKQQSTEFIPYEEILKAQN-STSPLWLNTLILMMFFLVFRCLGYA 1006
            :..:        |....:..|..:...|...:.||:..: ..:.|:::.|:|.:|||..|.|.|.
Mouse   580 LTIY--------GMERGHLTCLDEQCPFRDPQIILRELDVEEAKLYMDFLVLGIFFLALRLLAYL 636

  Fly  1007 VLRF 1010
            |||:
Mouse   637 VLRY 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 81/232 (35%)
3a01204 363..1009 CDD:273361 182/662 (27%)
ABC2_membrane 744..943 CDD:279410 60/202 (30%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 190/705 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

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