DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and abcx-1

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_495321.3 Gene:abcx-1 / 183860 WormBaseID:WBGene00006522 Length:710 Species:Caenorhabditis elegans


Alignment Length:776 Identity:150/776 - (19%)
Similarity:276/776 - (35%) Gaps:265/776 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 DAKSNSPASLSYHFEKSAAANQQKQHHNINICNSHHPHHHSQNQPQHSL----------QLTFQN 357
            |.:|:...|:.:    |...::..:|...::.|     |::||:.:..:          |.|...
 Worm    13 DDESSGRDSIYF----STIRSRHAEHFFADMQN-----HNTQNEKKGIIRYLEYYEINSQSTRPY 68

  Fly   358 LNVLHNE---------------------RQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQ 401
            .|:|.|:                     :|.:.::|..:|..:|||||....|...:||..:.|.
 Worm    69 PNLLLNKLSFSKDLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMYTKESETISLLKIICGI 133

  Fly   402 RHID---SGSVFLNREPLTK-KWRRRIGYVLQEEIFFPQLTLRETVVYTALLRLPESM--PRAEK 460
            :.:.   ||.:.:|...::: :..:.||:|..|.   |..||.    ....|.:..:.  |..|:
 Worm   134 KDVRGKLSGDILVNGHRMSRDRLEKTIGFVSLES---PTSTLS----VRQYLHVHGNFYPPMTER 191

  Fly   461 MRQVDHILEAL--ELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHS 523
            ...|.|::..|  :||.   ....|.:...|:..:.:|..:|.:|:.:|.:::..:....:|.|.
 Worm   192 YGGVGHLINKLMTDLGL---FPVSDIICSRLNRSQWQRVKVASQLVRDPTILVCSDIFKDIDVHD 253

  Fly   524 AISLMKVLKRYAQLEQKTIVISVHQPSSQMFHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTI 588
            ...|:..|:.:|....:.:::::...|.|:.:||.|.::|..||..|||..:::.::||.||...
 Worm   254 QCFLIDYLREWAVKTNRIVIMAISPTSLQILNMFSKAMILASGRMIYFGPPKSMQQYFETIGCPC 318

  Fly   589 KPHYNPADFVLEQLKSHPDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILI 653
            .|:.|..|:.:: |.:|.::...   |::||                              |:.|
 Worm   319 PPYKNVCDYYVD-LVTHDNLTSD---ASRES------------------------------SVRI 349

  Fly   654 DDIINNYYNQRSNRHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSA 718
            ..::|. :||.:       ..:..|::|..:                                  
 Worm   350 ARLVNK-WNQTA-------PPVRRTASGKFL---------------------------------- 372

  Fly   719 GSGPGHSADDDWLSYPTS--FHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQLPR 781
                        |..||:  |.....::|              |.||..|.  ..|..|:|.|  
 Worm   373 ------------LDLPTAGIFMNLLTLIS--------------LFWFNFIN--NRASRIFFLL-- 407

  Fly   782 TEEFLHDLQGWM--------------FFSQTYWMLFALF------GALN----SFPSERE----- 817
               |:..|...:              |.::..::...:|      |.:|    :|.||.:     
 Worm   408 ---FIFSLSTCLSLHLSDLSLTLPDAFLNRNSYLELLIFYVPLFIGLVNLKKCTFLSEFDKFYLF 469

  Fly   818 VVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLGCTSLKLFFLMLIFL------- 875
            :.::.......:||.  |..||:.|.::|    |..::..|.|..||:.....|.||.       
 Worm   470 ISARHHLKELLKLSP--LKNMCSSLSIII----VSFVVELPFLLITSMVFAMPMSIFTDFHQKSS 528

  Fly   876 -LINTIVAQSVGFFIGACCMDMNVSITLSALYTLATQLFGGYLSSRIPEGLSW----IRYTSMIH 935
             .:.::|:.|..|||       |:|:         |||....:|:...|.||:    |.:.|:. 
 Worm   529 NHLTSLVSISSSFFI-------NLSV---------TQLVVNSVSNLSSEPLSFFFFVISWFSLF- 576

  Fly   936 YAYQNMQILEFREGAAIGCGSPSSYEICKQQSTEFIPYEEILKAQNSTSPLWLNTLILMMF 996
                            ..||.|             .|...|||..|   ||:..|..:..|
 Worm   577 ----------------FACGFP-------------FPIHSILKYFN---PLFFPTTSVFRF 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 55/260 (21%)
3a01204 363..1009 CDD:273361 137/706 (19%)
ABC2_membrane 744..943 CDD:279410 49/239 (21%)
abcx-1NP_495321.3 P-loop_NTPase 102..302 CDD:304359 49/209 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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