Protein Alignment E23 and pmp-3

DIOPT Version :9

• Sequence 1: NP_524648.3
• Gene: E23 / 43895
• FlyBaseID: FBgn0020445
• Length: 1017
• Species: Drosophila melanogaster
• Sequence 2: NP_001256607.1
• Gene: pmp-3 / 179968
• WormBaseID: WBGene00004060
• Length: 688
• Species: Caenorhabditis elegans
• Alignment Length: 309
• Identity: 69/309 - (22%)
• Similarity: 129/309 - (41%)
• Gaps: 73/309 - (23%)

  Fly   284 TDNLTSSNGLANIGKSILVDAKSNSPASLSYHFEK------SAAANQQKQHH------------- 329
            :|.|.:....:.:..|::|.|......|.|.|.::      |...::|::..
 Worm   377 SDCLETDRPPSTVPSSVVVIASDEDDKSASRHMQEIHGKQMSLERDEQEEEEAQYLLGGKTGQED 441

  Fly   330 ---------NINICNSHHPHHHSQNQPQHSLQLTFQNLNVLHNERQILSDVSGFVSPCEVLAIMG 385
                     .::......|:.||        .|..|.|::     ||:..        :.|.|.|
 Worm   442 DWPDDGVAITVDSATLSPPNDHS--------HLIVQLLSL-----QIIQG--------QTLLITG 485

  Fly   386 PSGSGKTTLLDCLSGQRHIDSGSVFLNREPLTKKWRRRIG--YVLQEEIFFP--QLTLRETVVY- 445
            .||.||::||...:|..|..||.:..:       |||...  :.|.::.:||  ..|||:.:||
 Worm   486 DSGCGKSSLLRMFAGLWHCSSGKMDCH-------WRRLTSNLFFLAQKPYFPSGNTTLRQQIVYP 543

  Fly   446 TALLRLPESMPRAEKMRQ---VDHILEALELGCCQQTKFGDYLNRGLSGGEKKRANIACELLTNP 507
            ...|::.:.:.|..::.:   ::|::|  ..|........|:: :.||.||.:|.::|....|.|
 Worm   544 VKALQVDKDVARITQILEWVKMEHLVE--RCGGLDTPVEWDWM-KTLSPGELQRLSLARVFYTKP 605

  Fly   508 LLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISV-HQPSSQMFH 555
            .::.|||.||.:.....:::.:.|:     |:|...:|: |:.|.:.||
 Worm   606 RIVFLDESTSAIGFELEMAIYRKLQ-----EEKITFVSIGHRYSLKQFH 649

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E23	NP_524648.3	ABCG_EPDR	350..572	CDD:213180	56/215 (26%)
		3a01204	363..1009	CDD:273361	53/202 (26%)
		ABC2_membrane	744..943	CDD:279410
pmp-3	NP_001256607.1	ABC_membrane_2	34..314	CDD:284003
		YddA	37..655	CDD:226646	69/309 (22%)
		ABCD_peroxisomal_ALDP	450..662	CDD:213190	59/236 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S3107
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.950