DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and abch-1

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:NP_495320.1 Gene:abch-1 / 174078 WormBaseID:WBGene00016973 Length:595 Species:Caenorhabditis elegans


Alignment Length:678 Identity:156/678 - (23%)
Similarity:245/678 - (36%) Gaps:168/678 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 QILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHIDSGSV-FLNREPLTK----KWRRRIG 425
            |||.::|...:..|:.||:|.:.|||||||:.|:.....|.|.: .|::..||:    |:...|.
 Worm    35 QILKNISFTATSGEIHAIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHIN 99

  Fly   426 YVLQEEIFFP-QLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALE-----LGCCQQTKFGDY 484
            |..|    :| .|::|..:.|.|.|.|..:....|    :||.:..|.     :|.... |..| 
 Worm   100 YRNQ----YPSSLSVRSLLYYHARLCLSSTHTSLE----IDHRISELSAMFDVIGYAHD-KLED- 154

  Fly   485 LNRGLSGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQP 549
                ||...::|.....|||.:|:|.::|:||:.|...||..|:..|..||....:.|:|::...
 Worm   155 ----LSFSARRRVMTVMELLKDPILTIIDDPTAYLSPLSAYQLIYALHFYAAKFNRIIIITLRNV 215

  Fly   550 SSQMFHMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPADFVLEQLKSHPDIREKLFI 614
            .|.:.|:......|..|..||.|.::.:..||:..|....|:.|||.:.|..|....:..:|   
 Worm   216 RSDLSHLLGSATCLFYGEVAYSGQMRLLPNHFKKAGFECPPNENPAAYYLSLLTIDKESMQK--- 277

  Fly   615 AAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINNYYNQRSNRHHHQYENLHHTS 679
                                                                             
 Worm   278 ----------------------------------------------------------------- 277

  Fly   680 NGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGPGHSADDDWLSYPTSFHTQFCVL 744
                |.|.:|.|..||....|:.:      |||. |.|:.:|.|...|....:  .|..|...:|
 Worm   278 ----VMETQEKATKLVAFRTDNDT------SSDI-SGSSATGTGVLLDSGRKN--PSISTVAAIL 329

  Fly   745 SSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLH-----DLQGWMFFSQTYWMLFA 804
                ||    |:||.:....:..|   ||.|.|  |.|...|.     .|...:||.:....|:.
 Worm   330 ----FR----RVLSLIGSTPSNSL---AGLIAF--PVTAAVLSFLRPTSLPSSLFFWKLLTFLYL 381

  Fly   805 LFGALNSFP--------SEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYPMLG 861
            |...:..||        |.||.....:.:.....|.::|...|.:..|.:.: .::...|..|..
 Worm   382 LLQTIVIFPNYSKTSLLSFRECNLYCQTTSLTIFSIFFLVYSCIQSSLFVGI-VLWSFKSEAMFQ 445

  Fly   862 CTSLKLFFLMLIFLLINTIVAQSVGFFIGACCMDMNV----SITLSALYTLATQLFGGYLSSRIP 922
             .||.||.|.:....|.||.|:    ::..|   .|:    :|.:.|.:.....:.|...||.|.
 Worm   446 -ISLNLFLLSIFSFSIFTICAR----YLKNC---SNIVILQTIIILAFFVSGNGVTGTTTSSSIQ 502

  Fly   923 EGLSWIRYTSMIH-YAYQNMQILEFREGAAIG--CGSPSSYEICKQQSTEFIPYEEILKAQNSTS 984
                  .|..:|: :.|.|..:.:....:...  |..||  .:||..          :...:...
 Worm   503 ------YYIGVINPFNYSNFLLSKLLSSSIDNEECTFPS--YMCKLS----------MNLHSDLY 549

  Fly   985 PLWLNTLILMMFFLVFRCLG--YAVLRF 1010
            |.|.....:...|.:..||.  :.|:.|
 Worm   550 PPWYAPNDVFTNFAILFCLSLTFLVISF 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 65/216 (30%)
3a01204 363..1009 CDD:273361 155/675 (23%)
ABC2_membrane 744..943 CDD:279410 51/216 (24%)
abch-1NP_495320.1 P-loop_NTPase 18..238 CDD:393306 65/216 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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