DRSC/TRiP Functional Genomics Resources

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Protein Alignment E23 and abca10

DIOPT Version :9

Sequence 1:NP_524648.3 Gene:E23 / 43895 FlyBaseID:FBgn0020445 Length:1017 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:747 Identity:148/747 - (19%)
Similarity:279/747 - (37%) Gaps:199/747 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 ILVDAKSNSPASLSYHFEKSAAANQQKQHHNINICNSHHPHHHSQNQPQHSLQLTFQNLNVLHNE 364
            ::.....:..:||.:..||..|....|:...|                 |.::.|:.:.:   ..
 Frog   448 LMAQTDDSGESSLGHFVEKVPADLHGKEAIRI-----------------HGVKKTYYDKD---KN 492

  Fly   365 RQILSDVSGFVSPCEVLAIMGPSGSGKTTLLDCLSGQRHIDSGSVFLNREPLTK-----KWRRRI 424
            .:.|.|:...:...::.|::|.||:||||||:.|||......||..:....|:.     :.::|:
 Frog   493 TEALRDLDLNIYEGQITALLGHSGAGKTTLLNILSGMCPTSGGSATVCNYKLSNMRHLGEIKKRV 557

  Fly   425 GYVLQEEIFFPQLTLRETVVYTALLRLPESMPRAEKMRQVDHILEALELGCCQQTKFGDYLNRGL 489
            |:..|.:|.|..||::|.:...|:::   .:|..|...:|..:|..|::...:..:...     |
 Frog   558 GFCPQGDIKFDPLTVKENLTVFAMIK---GIPSKEVAHKVQTVLSDLQMNDIENIEASK-----L 614

  Fly   490 SGGEKKRANIACELLTNPLLMLLDEPTSGLDSHSAISLMKVLKRYAQLEQKTIVISVHQPSSQMF 554
            |||:|::......:|.:|.::||||||:|||..|..::..:||. ::.::.|::.:.....:.: 
 Frog   615 SGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPCSRHNIWTILKE-SKADRVTLLSTQFMDEADI- 677

  Fly   555 HMFDKLLLLHQGRTAYFGDVQNIYRHFEDIGVTIKPHYNPA---DFVLEQLKSH----------- 605
             :.|:.:::.:|:....|....:.|.: .:|..::...:|:   :.:...:|.|           
 Frog   678 -LADRKVVISKGKLKCVGTSLFLKRKW-GVGYHLRMQVSPSCDVELMTSIIKQHIPSTKLTTQNE 740

  Fly   606 -----------PDIREKLFIAAKESHGNYLNRNCITSSHHNQVSVSGAKGKKQADSILIDDIINN 659
                       .|:...||:......||.:....::.:..:.|.:. .:|:.:.:|       .:
 Frog   741 EELTYTLPFENMDVFPDLFLHLDGQVGNSIVNYGVSMTTLDDVFLK-LEGEGEIES-------GD 797

  Fly   660 Y--YNQRSNRHHHQYENLHHTSNGCRVEEDEEAAQHLVWCAADSQSNFSSCASSDCHSYSAGSGP 722
            |  :|..|                 |..||.|              :||:.........|.....
 Frog   798 YDVFNPES-----------------RTNEDRE--------------DFSTEMEESLLQMSDSGNV 831

  Fly   723 GHSADDDWLSYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLAL----------------- 770
            ..|..:.|...         ||:....|..|.|..:|.  |::|.|.|                 
 Frog   832 TLSGWELWRQQ---------VLAVARIRLLKLRHDTKS--FRSILLLLVVITLPPIIIIITSNIV 885

  Fly   771 -------MAGAIWFQLPRT--EEFLHDLQGWMFFSQTYWMLFALFGALNSFPSEREVVSKE---- 822
                   :...::||.||.  .::..||   :..:.|...:....||:.....|.:||:.|    
 Frog   886 NTFDAWELTPHLYFQSPRNRLNKYYTDL---LICNNTGSSIEDFVGAVKEQNIEVQVVNGEYDTE 947

  Fly   823 --RRSGAYRLSAY---YLAKMCAELPLVITLPTVYLMISYPML-------------------GCT 863
              :..||..:|..   |...:.|......:||.:..:||..:|                   |..
 Frog   948 TVKYRGAIEVSQMEKGYNFTIVANPKAFNSLPVLLNIISNALLKILKVSGHFRVWNHPITTDGTD 1012

  Fly   864 SLKLFFLMLIFLLINTIVAQSVGFFIGACCMDMNVSIT------------LSALYTLATQLFGGY 916
            .:.|.::.|||.:|          |..|.|..:.:|.|            :|.|:..| ..||..
 Frog  1013 IIFLPYMSLIFFII----------FASAFCPHIAMSSTEDNRINARNQLRISGLFPSA-YWFGQA 1066

  Fly   917 LSSRIPEGLSWIRYTSM--IHYAYQNMQILEF 946
            |...|   |.||....|  |::|:.:..:|:|
 Frog  1067 LVDVI---LYWILLFLMVAIYFAFNSYILLDF 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E23NP_524648.3 ABCG_EPDR 350..572 CDD:213180 55/226 (24%)
3a01204 363..1009 CDD:273361 139/684 (20%)
ABC2_membrane 744..943 CDD:279410 56/266 (21%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 148/747 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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