DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sif and PLEKHN1

DIOPT Version :10

Sequence 1:NP_001261446.1 Gene:sif / 43892 FlyBaseID:FBgn0085447 Length:2734 Species:Drosophila melanogaster
Sequence 2:NP_001397626.1 Gene:PLEKHN1 / 84069 HGNCID:25284 Length:663 Species:Homo sapiens


Alignment Length:366 Identity:83/366 - (22%)
Similarity:109/366 - (29%) Gaps:136/366 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 PMPSTESPVTSPEMGRRRYNYYNANAAQT------LGHPPHMHQHGMAMGM--GGGGGGGHHIMN 458
            |:|..||...|..||..|.:.  ::..||      |..|.....|.:....  ...|....|..:
Human   375 PLPGAESFPGSQVMGSGRGSL--SSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPD 437

  Fly   459 NNTMGRAS----------SQSSRFSGSRSSHEIGRGYPPRNLYLEL-ERERSCIEGSPPSDNVMF 512
            .....|||          |.|||..||::..| ||| |...|:|:| :..|..:|.||.:     
Human   438 QANSDRASIGRRRTELRRSGSSRSPGSKARAE-GRG-PVTPLHLDLTQLHRLSLESSPDA----- 495

  Fly   513 DNQCYATTPSSSNGNSDQDQSYGQQQSSGQHPQQQQGPPQRSSRHQHHHQQAPNVTPTPGSPTSR 577
                                                  |..:|...|....|...||...|    
Human   496 --------------------------------------PDHTSETSHSPLYADPYTPPATS---- 518

  Fly   578 LLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQSMENL----------EFAESLPGSNQRS---- 628
                   |.|.|..:|:          |..|| :|::.          ....|:|.|:.||    
Human   519 -------HRRVTDVRGL----------EEFLS-AMQSARGPTPSSPLPSVPVSVPASDPRSCSSG 565

  Fly   629 ---PYPLRRPNAKSSTL------------PLPPHRPLSTIRDKERDRD-----RDGYYSDRNELI 673
               ||.|.:..|..|..            |.||..|......:|...:     .||         
Human   566 PAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG--------- 621

  Fly   674 RERERERDRGY--LSDHNSSFSNSRCASCIGESAR---AQW 709
            |...|.||.||  |.|...|.|:.:|....|..|.   .||
Human   622 RSPRRSRDPGYDHLWDETLSSSHQKCPQLGGPEASGGLVQW 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sifNP_001261446.1 WH1 35..144 CDD:214674
PH1_Tiam1_2 860..985 CDD:269937
Tiam_CC_Ex 999..1096 CDD:408184
RBD 1141..1207 CDD:128731
PDZ 1220..1299 CDD:214570
RhoGEF 1456..1647 CDD:238091
PH2_Tiam1_2 1650..1823 CDD:269957
PHA03307 2227..>2510 CDD:223039
PLEKHN1NP_001397626.1 PH-like 96..229 CDD:473070
PH_PLEKHN1 268..388 CDD:270132 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.