DRSC/TRiP Functional Genomics Resources

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Protein Alignment sif and VAV2

DIOPT Version :9

Sequence 1:NP_001261446.1 Gene:sif / 43892 FlyBaseID:FBgn0085447 Length:2734 Species:Drosophila melanogaster
Sequence 2:XP_016870597.1 Gene:VAV2 / 7410 HGNCID:12658 Length:896 Species:Homo sapiens


Alignment Length:593 Identity:124/593 - (20%)
Similarity:225/593 - (37%) Gaps:161/593 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1450 LTDAEKLRKVVMELVDTERTYVKHLNNLLEHYLEPMKRETFLSNAEINALFGNIHEIVTFQRQFL 1514
            :|:.:|....::|:.:||..|.:.|.::.::|:.|::  ..||.|::.|:|.|:.:::.....||
Human   193 MTEDDKRNCCLLEIQETEAKYYRTLEDIEKNYMSPLR--LVLSPADMAAVFINLEDLIKVHHSFL 255

  Fly  1515 QNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPNEGNHA 1579
            :.::.|:.:...               .:...||.:.....:|..:|:         |.....:.
Human   256 RAIDVSVMVGGS---------------TLAKVFLDFKERLLIYGEYCS---------HMEHAQNT 296

  Fly  1580 LQEFLAARNPKQQH-----------SSTLESYLIKPIQRILKYPLLLQQMRNLTDTRADEHVHLC 1633
            |.:.||:|...:|.           ...|:..|:.|:||:|||.|||:::.:.:..| .|...|.
Human   297 LNQLLASREDFRQKVEECTLKVQDGKFKLQDLLVVPMQRVLKYHLLLKELLSHSAER-PERQQLK 360

  Fly  1634 EALKGMEKVAEHINEMQRIHE------EYGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGVEWLN 1692
            |||:.|:.:|.:|||::|..|      |:.:..::|..:.::..:..||   |:         |.
Human   361 EALEAMQDLAMYINEVKRDKETLRKISEFQSSIENLQVKLEEFGRPKID---GE---------LK 413

  Fly  1693 ISDFLGKIKKGLELHAMCFVFKSAVVFLCKER--LRQKKKLMGVSSKNATNEVEIIRYQVLIPVT 1755
            :...:...|:...|    |:| ..||.:||.:  ..:.|:::.:.....|::          |:.
Human   414 VRSIVNHTKQDRYL----FLF-DKVVIVCKRKGYSYELKEIIELLFHKMTDD----------PMN 463

  Fly  1756 EVQVRASSAKDMDSH------FLWE----------LIHLRSQLQRRSEKVYVLSNSTADFRNAFL 1804
            ...|:..:...:.||      .||.          ||||:.:               ..|: .|.
Human   464 NKDVKKQAGFPLPSHPAVLGGGLWSHGKMWSYGFYLIHLQGK---------------QGFQ-FFC 512

  Fly  1805 KTIRQIIRESVRNMSIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLERPKQQITIVHGSHTLG 1869
            || ..:.|:.:....:.|.|......:.:.||.| |.:.....|.:..:      ..:.|:...|
Human   513 KT-EDMKRKWMEQFEMAMSNIKPDKANANHHSFQ-MYTFDKTTNCKACK------MFLRGTFYQG 569

  Fly  1870 KPKKKSGSQRH-------------SAGNIDYDNLSGSQEADDLPPSVGVVHYASGHTHGQQMQPA 1921
            ....|.|...|             |..::|   .||   |...|..|.:.:|     ||....| 
Human   570 YMCTKCGVGAHKECLEVIPPCKFTSPADLD---ASG---AGPGPKMVAMQNY-----HGNPAPP- 622

  Fly  1922 GFRGRSKTV-----GDVTEITCSSPEPHQQQQQQQQQQQQLMQQGHAHAHP----HPHPHPREPP 1977
                 .|.|     |||.|:....||       ....:.:|:|...:...|    .|.|....||
Human   623 -----GKPVLTFQTGDVLELLRGDPE-------SPWWEGRLVQTRKSGYFPSSSVKPCPVDGRPP 675

  Fly  1978 --PPPIRQ 1983
              .||.|:
Human   676 ISRPPSRE 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sifNP_001261446.1 WH1 35..144 CDD:214674
PH1_Tiam1_2 860..985 CDD:269937
PH 873..974 CDD:278594
TIAM1_RBD 1141..1219 CDD:176413
PDZ_signaling 1221..1308 CDD:238492
RhoGEF 1456..1647 CDD:238091 45/201 (22%)
PH2_Tiam1_2 1650..1823 CDD:269957 33/196 (17%)
PH 1693..1812 CDD:278594 24/136 (18%)
VAV2XP_016870597.1 CH_VAV2 2..120 CDD:409112
RhoGEF 202..375 CDD:214619 46/199 (23%)
PH_Vav 389..534 CDD:269930 32/188 (17%)
C1_VAV2 537..594 CDD:410418 10/63 (16%)
SH3_VAV2_1 608..667 CDD:212913 16/76 (21%)
SH2_Vav2 685..787 CDD:198269
SH3_VAV2_2 837..894 CDD:212910
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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