Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005163380.1 | Gene: | vav3b / 559145 | ZFINID: | ZDB-GENE-070912-251 | Length: | 853 | Species: | Danio rerio |
Alignment Length: | 630 | Identity: | 126/630 - (20%) |
---|---|---|---|
Similarity: | 233/630 - (36%) | Gaps: | 159/630 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1362 SKDLYSPEAESSPATSFVDPAAMAAQLAVGGVGGVVVGGLGVAKPTSRTSSFE-----IENLLKT 1421
Fly 1422 AEQETRKSSPTGSVTSS------VSTTALTPSRQLTDAEKLRKVVMELVDTERTYVKHLNNLLEH 1480
Fly 1481 YLEPMKRETFLSNAEINALFGNIHEIVTFQRQFLQNLEESLDLEPDFNKFEHCGQFRNV--LFAI 1543
Fly 1544 GSAFLYYVNHFKLYSSFCASHSKAQKVL----HPNEGNHALQEFLA--ARNPKQQHSSTLESYLI 1602
Fly 1603 KPIQRILKYPLLLQQMRNLTDTRADEHVHLCEALKGMEKVAEHINEMQRIHEEYGAIFDHLFRQH 1667
Fly 1668 QKSCKQPIDLSPGDLLYYG---GVEWLNISDFLGKIKKGLELHAMCFVFKSAVVFLCKER--LRQ 1727
Fly 1728 KKKLMGVSSKNATNEVEIIRYQVLIPVTEVQVRASSAKDMDSHFLWELIHLRSQLQRRSEKVYVL 1792
Fly 1793 SNSTADFRNAFLKTIRQIIRESVRNMSIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLERPKQ 1857
Fly 1858 QIT---IVHGSHTLGK--PKKKSGSQRHSAGNIDYDNLSGS-------------QEADDLPPSVG 1904
Fly 1905 VVHYASGHTHGQQMQPAGFRGRSKTVGDVTEITCSSPEPHQQQQQ 1949 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | |||
PH | 873..974 | CDD:278594 | |||
TIAM1_RBD | 1141..1219 | CDD:176413 | |||
PDZ_signaling | 1221..1308 | CDD:238492 | |||
RhoGEF | 1456..1647 | CDD:238091 | 51/198 (26%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 31/177 (18%) | ||
PH | 1693..1812 | CDD:278594 | 19/120 (16%) | ||
vav3b | XP_005163380.1 | CH | 4..115 | CDD:278723 | 1/1 (100%) |
RhoGEF | 194..368 | CDD:279015 | 51/196 (26%) | ||
PH_Vav | 381..503 | CDD:269930 | 29/165 (18%) | ||
PH | 406..499 | CDD:278594 | 19/132 (14%) | ||
C1 | 511..556 | CDD:237996 | 10/54 (19%) | ||
SH3 | 585..644 | CDD:302595 | 10/49 (20%) | ||
SH2 | 653..755 | CDD:301589 | |||
SH3_VAV3_2 | 798..852 | CDD:212911 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1291 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |