Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009296712.1 | Gene: | arhgef4 / 559017 | ZFINID: | ZDB-GENE-070912-575 | Length: | 3088 | Species: | Danio rerio |
Alignment Length: | 2190 | Identity: | 407/2190 - (18%) |
---|---|---|---|
Similarity: | 690/2190 - (31%) | Gaps: | 830/2190 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 223 VDGQQQVGSGKVVSAV-SSTSLYDNVASGGPGTNQGADTL-PRQMKGG-----QQDRQDVANSGV 280
Fly 281 NTNTPGVIVTGVGNVGS-DMCGQNHVGSQVGNDDPAACQMDMDLSKSEGTQAGGGLHQSVGTCTS 344
Fly 345 SSKGTGTRNKDFGDDMTRDAHSHD----------------------------------------M 369
Fly 370 HQHNVINNNTRRKTKSTEDMNVDTSTLKRMLKPMPSTESPVTSPEMGRRRYNYY-NANAAQTLGH 433
Fly 434 PPHMHQHGMAMGMGGGGGGGHHIMNNNTMGRASSQSS----RFSGSRSSHEIGR----GY----- 485
Fly 486 -----------PPRNLYLELERE---------------RSCIE------------GSPPSD---- 508
Fly 509 NVMFDNQCYATTPSSSNGNSDQDQSYGQQQSSG----QHPQ------------QQQGPP------ 551
Fly 552 QRSSRHQHHHQQAPNVTPTP------------GSPTSRLLLEYE-----MHLRNTLAKGMDAESY 599
Fly 600 SLHTFEALLSQSMENLEFAESLPGSNQRSPYPLRRPNAKSSTLPLPPHRPLSTIR---------- 654
Fly 655 --------------------DKERDRDRDGYYSDRNEL------------IRERERERDRGYLSD 687
Fly 688 HNSSFSNSRCASCIGESARAQ-----WFR-------------------HSDGWRSGSSTIGSGS- 727
Fly 728 -----------GHGMMTQQ---IPGSG----------------HKRSPWDSL-----------PS 751
Fly 752 LRQDSSLNDSGYKSARAD--------SLEQRAEFIR--QDSLRSEYLSDRESRYGIVQQ------ 800
Fly 801 -ASIESTDSR--------------------------MCYLTSSEISDDDRMSLTTAVSDE----- 833
Fly 834 --DDGESVMASPY------KAKATGTAASSFNCTGAVRKAGFLSVKKWLLRKKHQI--------- 881
Fly 882 ------ELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVEAAPKH-------------LIIVDGA 927
Fly 928 IMQPIPEHP-----KRDYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSACAAAFARHRGKTGTL 987
Fly 988 HLLQEEIFRLEKAIESDHKLKHMAELQQSVVTDQETRH--QIQTQILQWE----------ENLER 1040
Fly 1041 LH--------------CE----QFRLRCYMASLQSGELPNPKSLLT---HVSRPTKNTLNK---- 1080
Fly 1081 ---------------------LGVF------TVSSFHAFICARSPSLLNNLLAGRGATKRRPPML 1118
Fly 1119 SRSN--SGSSRRSMQ-MNSRDEP-----------------EKTFKVAMPDNAYSTVYLRDAMSVE 1163
Fly 1164 EFLASACARRNLNPMEHFVRVKKRRD----MEDHNYFVPHRNDLIENYLHNHEFVEVCMKILYQV 1224
Fly 1225 ELQRTTLEQM-----------------------WGFSVEA--ELIENAERQ----DELCCYVSRV 1260
Fly 1261 EDKSVAMHNGIIKGDEIMVINGAIVSDLDMMYLESVLQEEQSL------------SMMMRSSRTE 1313
Fly 1314 PPDLVGI-------MRVTDDMID-----------------------------SLVCPPPPTDPPV 1342
Fly 1343 MSEEMITGLIVPAPGWNGTSKDLYSPEAESSPATSFVDPAAMAAQLAVGGV---GGVVVGGL-GV 1403
Fly 1404 AKPTSRTSSFEIENLLKTAEQETRKSSPTGSVTSS-----VSTTALTPSRQ-------------- 1449
Fly 1450 --------------LTDAEKLR-KVVMELVDTERTYVKHLNNLLEHYLEPMKRET-FLSNAEINA 1498
Fly 1499 LFGNIHEIVTFQRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYSSFCAS 1563
Fly 1564 H-------SKAQKVLHPNEGNHALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLLLQQMRNL 1621
Fly 1622 TDTRADEHVHLCEALKGMEKVAEHINEMQRIHEEYGAI--------------------------- 1659
Fly 1660 ------------------FDH--LFRQHQKSCKQPIDLSPGDLLYYGG------VEWLNI----- 1693
Fly 1694 SDFLGKIKKGLELHAMCFVFKSAVVFLCKERLRQKKKLMGVSSKNATNEVEIIRY--QVLIPVTE 1756
Fly 1757 VQVRASSAKDMDSH--------FLWELIHLRSQLQRRSEKVYVLS 1793 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 26/157 (17%) | ||
PH | 873..974 | CDD:278594 | 21/133 (16%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 13/81 (16%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 17/127 (13%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 62/199 (31%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 45/212 (21%) | ||
PH | 1693..1812 | CDD:278594 | 28/116 (24%) | ||
arhgef4 | XP_009296712.1 | Ehrlichia_rpt | 392..854 | CDD:118064 | |
Ehrlichia_rpt | 599..>1192 | CDD:118064 | 33/150 (22%) | ||
SH3_ASEF | 2546..2617 | CDD:212906 | 14/71 (20%) | ||
RhoGEF | 2659..2838 | CDD:279015 | 62/196 (32%) | ||
PH_Collybistin_ASEF | 2843..2982 | CDD:269931 | 30/153 (20%) | ||
PH | 2871..2972 | CDD:278594 | 25/115 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1291 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |