Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
Alignment Length: | 2438 | Identity: | 449/2438 - (18%) |
---|---|---|---|
Similarity: | 764/2438 - (31%) | Gaps: | 818/2438 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 LSTPASPSRVRQEPQCTCMSAEQYARLRTDPRVRGSSTLPRNVGSHRITDVDGQQQVGSG----- 232
Fly 233 KVVSAVSSTSLYDNVASGGPGTNQGADTLPRQMKGGQQDRQDVANSGVNTNTPGVIVTGVGNV-- 295
Fly 296 ----GSDMCGQNHVGSQVGNDDPAACQMDMDLSKSEGTQAG--GGLHQSVGTCTSSSKGTGTRNK 354
Fly 355 DFGDDMTRDAHSHDMHQHNVINNNTRRK-TK-STEDMNVDTSTLKRMLKPM--PSTESPVTS--P 413
Fly 414 EMGRRRYNYYNANAAQTLGHPPHMHQHGMAMGMGGGGGGGHHIMNNNTMGRASSQSSR-----FS 473
Fly 474 GSRS-----SH---EIGRGYPPRNLYLELER------------ERSCIE---GSPPSDNVMFDNQ 515
Fly 516 CYATTPSSSNGNSDQDQSYGQQQSSGQHPQQQQ-----------------GPPQRSSRHQ----- 558
Fly 559 HH--HQQAPNVT----------PTPGSPTSRLLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQS 611
Fly 612 MENLEFAESLPGSNQRSP--YPLRRPNAKSSTLP-------------------------LPPHRP 649
Fly 650 LSTIRDKERDRDRDGYYSDRNELIRERERERD----RGYLSDHNSSFSNSRCASCIGES---ARA 707
Fly 708 QWFRHSDGWRSGSSTIGSGSGHGMMTQQIPGSGHKRSPWDSLPSLRQDSSLNDSGYKSARADSLE 772
Fly 773 QRAEFIRQ---------------DSLRSEYLSDRESRYGIVQQASIESTDSRMCYLTSSEISDDD 822
Fly 823 RMSLTTAVSDEDDGESV---MASPYKAKATGTAASSFNCTGAVRKAGFLSVKKWLLRKKHQIELA 884
Fly 885 RKRGWKGYWVCLKGTTLLFYPCDSREGRSVEAAPKHLIIVDGAIMQPIPEHP--KRDYIFCLSTA 947
Fly 948 FGDAYLFQAPCQVELEN-WVNSIHSA--------------------CAAAFARHRGKTGTLHLLQ 991
Fly 992 EEIFRLEKAIESDHKLKHMAELQQSVVTDQETRHQIQ---TQILQWEENLERLHCEQFRLRCYMA 1053
Fly 1054 SLQSGELPNPKSLLTHVSRPTKNTLNK------LGVFTVSSFHAFICARSPSLLNNLLAGRGATK 1112
Fly 1113 RRPPMLSRSNSGSSRRSMQMNSRDEPEKTFKVAMPDNAYSTVYLRDAMSVEEFLASACARRNLNP 1177
Fly 1178 MEHFVRVKKRRDMEDHNYFVPHRNDLIENYLHNHE-----FVEVCMKILYQVELQRTTLEQMWGF 1237
Fly 1238 SVEAELIENAERQDELCCYVSRVE-------DKSVAMHNGIIKGDEIMVINGAIVSDLDMMYL-E 1294
Fly 1295 SVLQEEQSLSMMMRSSR--------------TEPPDLVGIMRVTDDMIDSLVCPPPPTDPPVMSE 1345
Fly 1346 EMITGLIVPAPGWNGTSK---------------------------------------------DL 1365
Fly 1366 YSPEAESSPATSFVDPAAMAAQLAVGGVGGVVV---GGLGVAKPT--SRTSSFEIENLLKTAEQE 1425
Fly 1426 TRKSSPTGSVTSSVSTTALTPSRQLTDAEKLRKVVMELVDTERTYVKHLNNLLEHYLEPMKRETF 1490
Fly 1491 LSNAEI---NALFGNIHEIVTF-QRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYV 1551
Fly 1552 NHFKLYSSFCASHSKAQKVLHPNEGN--HALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLL 1614
Fly 1615 LQQMRNLTDTRADEHVHLCEALKGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSP 1679
Fly 1680 GDLLYYGGVE-WLNISDFLGKIKKGLELHAMCFVFKSAVVFLCKERLRQKKKLMGVSSKNATNEV 1743
Fly 1744 EIIRYQV--LIPVTEVQVRASSAKDMDSHFLWELIHLRSQLQRRSEKVYVLSNSTADFRNAFLKT 1806
Fly 1807 IRQIIRESVRNMSIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLERPKQQITIVHGSHTLGKP 1871
Fly 1872 KKKSGSQRHS----------------------AGN-IDYDNLSGSQEADDLPPSVGVVHYASGHT 1913
Fly 1914 HGQQMQPAGFRGRSKTVGDVTEI----TCSSPE-------PHQQQQQQQQQQQQLMQQGHAHAHP 1967
Fly 1968 HPHPHPREPPPPPIRQPHLHHHSSDIERIDPGTKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTS 2032
Fly 2033 TLSVGSTGSQARLIQ----SSHPPASYQPVLMKDLGKPSPDESELESESEVHAAQVAASFNLSLG 2093
Fly 2094 SSGSLFASDARDNQTQSRTQSQIHSLHPS------------------PRQSPRQSPR-------- 2132
Fly 2133 ------------QSP-KQD----IEVIEIFESEAERLAASQQVAVVHQHPS----------DQAR 2170
Fly 2171 ESGHKQRRD-RDRNPTETDATARFMDKHLSDLEQENLTDGTCDIVAYMESLREKAFDPQDLAEDT 2234
Fly 2235 GDHQ---QNDSSLSPEPQTIVENTQQTVVVDIE 2264 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 22/147 (15%) | ||
PH | 873..974 | CDD:278594 | 18/123 (15%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 13/82 (16%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 16/94 (17%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 55/196 (28%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 28/175 (16%) | ||
PH | 1693..1812 | CDD:278594 | 21/120 (18%) | ||
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | 26/140 (19%) |
SPEC | 314..>468 | CDD:238103 | 24/156 (15%) | ||
SPEC | 563..778 | CDD:238103 | 42/230 (18%) | ||
SPEC | 782..997 | CDD:238103 | 45/288 (16%) | ||
SPEC | 897..1119 | CDD:238103 | 47/298 (16%) | ||
SPEC | 1125..1226 | CDD:197544 | 14/123 (11%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 55/194 (28%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 26/150 (17%) | ||
PH | 1495..1580 | CDD:278594 | 17/108 (16%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 16/94 (17%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 13/56 (23%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462263 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |