Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008771798.1 | Gene: | Mcf2 / 317598 | RGDID: | 1566098 | Length: | 1110 | Species: | Rattus norvegicus |
Alignment Length: | 1360 | Identity: | 255/1360 - (18%) |
---|---|---|---|
Similarity: | 431/1360 - (31%) | Gaps: | 487/1360 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 879 HQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVEAAPKHLII----VDGAIMQPIPEHPKRD 939
Fly 940 YIFCLSTAFG--DAYLFQAP--CQ---------VELENWVNSIHSACAAAFARHRGKTGTLHLLQ 991
Fly 992 EEIFRLEKAIESDHKLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCE---QFRLRCYMA 1053
Fly 1054 SLQSGELPNPKSLLTHVSRPTKNTLNKLGVFTVSSFHA-FICARSPSLLNNLLAGRGAT-KRRPP 1116
Fly 1117 MLSRSNSGSSRRSMQMNSRDEPEKTFKVAMPDNAYSTVYLRDAMSVEEFLASACARRNLNPMEHF 1181
Fly 1182 VRVKKRRDMEDHNYFVPHRNDLIENYLHNHEFV-------EVCMKILYQVELQRTTLE------- 1232
Fly 1233 -------QMWGFSVE-AELIENAE----RQDEL-------------CCYVSRVEDKSVAMHNGII 1272
Fly 1273 KGDEIMVINGAIVS-------DL------DMMYLESVLQEEQSLSMMMRSSRT------------ 1312
Fly 1313 ------------------EPPDLVGIMRVTDDMI------------------DSLVCPPPPTDPP 1341
Fly 1342 VMSE--EMITGLIVPAPGWNGTSKD---------LYSPEAESSPATSFVDPAAMAAQLAVGGVGG 1395
Fly 1396 VVVGGLGVAKPTSRTSSFEIENLLKTAEQETRKSSPTGSVTSSVSTTALTPSRQLTDAEKL---- 1456
Fly 1457 ----RKVVMELVDTERTYVKHLNNLLEHYLEPMKR-------ETFLSNAEINALFGNIHEIVTFQ 1510
Fly 1511 RQ-FLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYSSFCASHSKAQKVLHPN 1574
Fly 1575 EGNHALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLLLQQMRNLTDTRADEHVHLCEALKGM 1639
Fly 1640 EKVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPI----DLSPGDLLYYGGVE-WLNISDFLGK 1699
Fly 1700 IK-----KGLELHAMCFVFKSAVVFLCKERLRQKKKLMGVSSKNATNEVEIIRYQVLIPVTEVQV 1759
Fly 1760 RASSAKDMDSHFLWELIHLRSQLQRRSEKVYVLSNSTADFRNAFLKTIRQIIRESVRNMSIPMKN 1824
Fly 1825 FGGSSGSVSGHSSQGMGSMGYPGNSQTLERPKQQITIVHGSHTLGKPKKKSGSQRHSAGNIDYDN 1889
Fly 1890 LSGSQEADDLPPSVGVVHYASGHTHGQQMQPAGFRGRSKTVGDVTEITCSSPEPHQQQQQQQQQQ 1954
Fly 1955 QQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSDIERIDPGTKSEGEEDSQQGTIRPKATL 2019
Fly 2020 GRTPNHLTLSTTSTLSVGSTGSQARLIQSSHPPASYQPVLMKDLGKPSPDESELESESEV 2079 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 27/122 (22%) | ||
PH | 873..974 | CDD:278594 | 24/111 (22%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 20/84 (24%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 27/131 (21%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 55/206 (27%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 30/182 (16%) | ||
PH | 1693..1812 | CDD:278594 | 23/123 (19%) | ||
Mcf2 | XP_008771798.1 | SEC14 | 119..259 | CDD:214706 | 33/161 (20%) |
SPEC | 399..590 | CDD:295325 | 30/195 (15%) | ||
RhoGEF | 685..862 | CDD:238091 | 54/198 (27%) | ||
PH-like | 869..1000 | CDD:302622 | 28/188 (15%) | ||
PH | 884..997 | CDD:278594 | 24/133 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |