Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001129190.1 | Gene: | Prex1 / 311647 | RGDID: | 1306534 | Length: | 1646 | Species: | Rattus norvegicus |
Alignment Length: | 1310 | Identity: | 249/1310 - (19%) |
---|---|---|---|
Similarity: | 439/1310 - (33%) | Gaps: | 423/1310 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 1384 MAAQLAVGGVGGVVVGGLGVAKPTSRTSSFEIENLLKTAEQETRKSSPTGSVTSSVSTTALTPSR 1448
Fly 1449 QLTDAEKLRKVVM-ELVDTERTYVKHLNNLLEHYLEPMKR------ETFLSNAEINALFGNIHEI 1506
Fly 1507 VTFQRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYSSFCASHSKAQKVL 1571
Fly 1572 HPNEGNHALQEFL---AARNPKQQHSSTLESYLIKPIQRILKYPLLLQQMRNLTDTRADEHVHLC 1633
Fly 1634 EALKGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGVEWLNISDF-- 1696
Fly 1697 -------LGKIKKGLELHAMCFVFKSAVVFLCKERLR---QKKKLMGVSSKNATNEVEIIRYQVL 1751
Fly 1752 IPVTEVQVRASSAKDMDSHFL-----WELIHLRSQLQRRSEKVYVLSNSTADFRNAFLKTIRQII 1811
Fly 1812 RESVRNMSIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLER-----PKQQITIVHGSHTLGKP 1871
Fly 1872 KKKSGSQRHSAGN------IDYDNLSGSQEADDLPPSV---GVVHYASGHTHGQQMQPAGFRGRS 1927
Fly 1928 KTVGDVTEITCSSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSD 1992
Fly 1993 IERIDPGT---KSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGSTGSQARLIQSSHPPAS 2054
Fly 2055 YQPVL------MKDLGKPSPDESELE---SESEVHAAQVAASFNLSLGSSGSLFASDARDNQTQS 2110
Fly 2111 RTQSQIHSLHPSPRQSPRQSPRQSPKQDIEVIEIFESEAERLAASQQVAVVHQHPSDQARESGHK 2175
Fly 2176 QRRDRDRNPTETDATARFMDKHLSDLEQENLTDGTCDIVAYMESLREKAFDPQDLAEDTGDHQQN 2240
Fly 2241 DSSLSPEPQTIVENTQQTVVVDIESPSRPATESDSTGNTTGPSERSGDETEEEATTSSLASHIVV 2305
Fly 2306 IDKKVDKIFKAKSPERP--ASTKVKG---------GRRQIYISPDRCKSQGSSPVRIIKIKSPRT 2359
Fly 2360 SLSDQGKRLSVC----------------------SSRDNSQDRLSAGRRTPSPRRSSEGGGILKH 2402
Fly 2403 TTGPDPGILKPPSSPAKSKSPDRSCLK----------KGGPSHVCSVETLSPRVSPRGS------ 2451
Fly 2452 -MDHLSPDRGMTSSSCLRHSPRSS-------FDSHGESDHNLDVPHGSRKRSMSAHGSFETGTRP 2508
Fly 2509 RAQETYQYYPVYDNQTCSDHYVAAAPTGRYGGGTSSRSRLSKSLERSTSRDSTTTSSSYGHR--A 2571
Fly 2572 YGVSPDRNYV 2581 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | |||
PH | 873..974 | CDD:278594 | |||
TIAM1_RBD | 1141..1219 | CDD:176413 | |||
PDZ_signaling | 1221..1308 | CDD:238492 | |||
RhoGEF | 1456..1647 | CDD:238091 | 60/200 (30%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 42/189 (22%) | ||
PH | 1693..1812 | CDD:278594 | 30/135 (22%) | ||
Prex1 | NP_001129190.1 | RhoGEF | 48..234 | CDD:279015 | 59/197 (30%) |
PH_Collybistin_ASEF | 239..391 | CDD:269931 | 40/182 (22%) | ||
PH | 278..384 | CDD:278594 | 26/117 (22%) | ||
DEP | 409..489 | CDD:295306 | 14/154 (9%) | ||
DEP_2_P-Rex | 501..593 | CDD:239887 | 18/127 (14%) | ||
PDZ | 630..697 | CDD:214570 | 17/107 (16%) | ||
PDZ | 714..768 | CDD:238080 | 12/61 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |