| Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_227201.4 | Gene: | Arhgef26 / 310460 | RGDID: | 1562559 | Length: | 869 | Species: | Rattus norvegicus |
| Alignment Length: | 697 | Identity: | 124/697 - (17%) |
|---|---|---|---|
| Similarity: | 234/697 - (33%) | Gaps: | 228/697 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1347 MITGLIVPAPGWNGTSKDLYSPEAESSPATSFVD-PAAMAAQLAVGGVGGVVVGGLGVAKPTS-- 1408
Fly 1409 ---RTSSFEIENLLKTAEQ-------------------------------------------ETR 1427
Fly 1428 KSSP-------------TGSVTSSVSTTALTPSRQLTDAEKLR-KVVMELVDTERTYVKHLNNLL 1478
Fly 1479 EHYLEPMKRETFLSNAEINALFGNIHEIVTFQRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAI 1543
Fly 1544 GSAFL---YYVNHFKLYSSFCASHSKAQKVLHPNEGNHALQEFLAARNPKQQHSSTLE------- 1598
Fly 1599 ----SYLIKPIQRILKYPLLLQQMRNLTDTRADEHVHLCEALKGMEKVAEHINE----MQRIHEE 1655
Fly 1656 YGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGVEWLNISDFLGKIKKGLELHAMCFVFKSAVVFL 1720
Fly 1721 CKERLRQKKKLMGVSSKNATNEVEIIRYQVLIPVTEVQVRASSAKDMDSHFLWELIHLRSQLQRR 1785
Fly 1786 SEKVYVLSN-STADFRNAFLKTIRQIIRESVRN---MSIPMKN-----FGGSSGS--------VS 1833
Fly 1834 GHSSQGMGSMGYPGNSQTLERPKQQITIVHGSHTLGKPKKKSGSQRHSAGNIDYDNLSGSQEADD 1898
Fly 1899 LPPSVGVV-----HYASGHTHGQQMQPAGFRGRSKTVGDVTEITCSS 1940 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
| PH1_Tiam1_2 | 860..985 | CDD:269937 | |||
| PH | 873..974 | CDD:278594 | |||
| TIAM1_RBD | 1141..1219 | CDD:176413 | |||
| PDZ_signaling | 1221..1308 | CDD:238492 | |||
| RhoGEF | 1456..1647 | CDD:238091 | 39/205 (19%) | ||
| PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 27/176 (15%) | ||
| PH | 1693..1812 | CDD:278594 | 16/119 (13%) | ||
| Arhgef26 | XP_227201.4 | TDA11 | 140..>348 | CDD:293689 | 20/79 (25%) |
| RhoGEF | 441..620 | CDD:279015 | 38/202 (19%) | ||
| PH_ephexin | 641..779 | CDD:269929 | 35/212 (17%) | ||
| SH3_ARHGEF16_26 | 791..845 | CDD:212871 | 9/55 (16%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||