Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008765203.2 | Gene: | Arhgef4 / 301334 | RGDID: | 1586179 | Length: | 1751 | Species: | Rattus norvegicus |
Alignment Length: | 1894 | Identity: | 342/1894 - (18%) |
---|---|---|---|
Similarity: | 552/1894 - (29%) | Gaps: | 730/1894 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 130 PIDAKQFRECCSPSFKFSRKASSSYSLKLDPPGKGKVKAKRKPLSTPASPSRVRQEPQCTCMSAE 194
Fly 195 QYARLRTDPRVRGSSTLPRNVGSHRITDVDGQQQVGSGKVVSAVSSTSLYDNVASGGPGTNQGAD 259
Fly 260 TLPRQMKGGQQDRQDVANSGVNTNTPGVIVTGVGNVGSDMCGQNHVGSQVGNDDPAACQMDMDLS 324
Fly 325 KSEGTQAGGGLHQSVGTCTSSSKGTGTRNKDF--GDDMTRDAHSHDMHQHNVINNNTRRKTKSTE 387
Fly 388 DMNVDTSTLKRMLKPMPSTESPVTSPEMGRRRYNYYNA-------NAAQTLGHPPHMHQHGMAMG 445
Fly 446 MGGGGGGGHHIMNNNTMGRASSQSSRFSGSRSSHEIGRGYPPRNLYLELERERSCIEGSPPSDNV 510
Fly 511 MFDNQCYATTPSSSNGNSDQDQSYGQQQSSG---QHPQQQQGPPQ-------RSSRHQHHHQ--- 562
Fly 563 -QAPNVT----------------PTPGSPTSRLLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQ 610
Fly 611 SMENLEFAESLPGSNQRSPYPLRRPNAKSSTLPLPPHRPLSTIRDKERDRDRDGYYSDRNELIRE 675
Fly 676 RERERDRGYLSDHN---------------SSFSNSRCASCIGESARAQWFRHSDGWRSGSSTIGS 725
Fly 726 GSGHGMMTQQIPGSGHKRSPWDSLPSLRQDSSLNDSGYKSARADSLEQRAEFIRQDSLRSEYLSD 790
Fly 791 RESRYGIVQQASIESTD-------SRMCYLTS------SEISDDDRMSLTTAVSDEDDGESVMAS 842
Fly 843 PYKAKATGTAASSFNCTGAVRKAGFLSVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCD 907
Fly 908 SREGRSVEAAPKHLIIVDGAIMQPIPEHPKRDYIFCLSTAFGDAYLFQAPCQVELENWVNSIHSA 972
Fly 973 CAAAFARHRGKTGTLHLLQE-------EIFRLEKAIESDHKLKHMAELQQSVVTDQETRHQIQTQ 1030
Fly 1031 ILQWEENLERLHCEQFRLRCYMASLQSGELPNPKSLLTHVS-------RPTKNTLNK-------- 1080
Fly 1081 -LGVFTVSSFHAFICARSPSLLNNLLAGRGATKRRPPMLSRSNSGSSRRSMQMNSRDEPEKTFKV 1144
Fly 1145 AMPDNAYSTVYLRDAMSVEEFLASACARRNLNPMEHFVRVKKRRDMED--HNYFVPHRNDLIENY 1207
Fly 1208 LHNHEFVEVCMKILYQVELQRTTLEQMWGFSVEAELIENAERQDELCCYVSRVEDKSVAMHNGII 1272
Fly 1273 KGDEIMVINGAIVSDLDMMYLES----VLQEEQSLSMMMRSSRTEPPDLVGIMRVTDDMIDSLVC 1333
Fly 1334 PPPPTDPPVMSEEMITGLIVPAPGWNGTSKDLYSPEA-------ESSPATSFVDPAAMAAQLAVG 1391
Fly 1392 GVGGVVVGGLGVAKPTSRTSSFEIENLLKTAEQETRKSSPTGSVTSSVSTTALTPSRQLTDAEKL 1456
Fly 1457 RKVVMELVDTERTYVKHLNNLLEHYL-EPMKRETFLSNAEINALFGNIHEIVTFQRQFLQNLEES 1520
Fly 1521 LDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYSSFCASH----------SKAQKVLHPNE 1575
Fly 1576 GNHALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLLLQQMRNLTDTRADEHVHLCEALKGME 1640
Fly 1641 KVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGVEWLNISDFL--GKIKKG 1703
Fly 1704 LELHA-----MCFVFKSAVVFLCKERLRQKKKLMGVSSKNATNEVEIIRYQVLIPVTEVQ-VRAS 1762
Fly 1763 SAKDMDSHFLWELIHLRSQLQ---RRSEKVYVLSNSTADFRNAFLKTIRQIIRESVR---NMSIP 1821
Fly 1822 MKNFGGSSGSVSGHSSQGMG---SMGYPG-------NSQTLERPKQQITIVHGSHTLGKPKKKSG 1876
Fly 1877 SQRHSAGNI 1885 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | 3/13 (23%) |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 24/124 (19%) | ||
PH | 873..974 | CDD:278594 | 18/100 (18%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 10/79 (13%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 10/90 (11%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 56/201 (28%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 32/186 (17%) | ||
PH | 1693..1812 | CDD:278594 | 18/129 (14%) | ||
Arhgef4 | XP_008765203.2 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |