DRSC/TRiP Functional Genomics Resources

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Protein Alignment sif and ARHGEF9

DIOPT Version :9

Sequence 1:NP_001261446.1 Gene:sif / 43892 FlyBaseID:FBgn0085447 Length:2734 Species:Drosophila melanogaster
Sequence 2:NP_001340852.1 Gene:ARHGEF9 / 23229 HGNCID:14561 Length:529 Species:Homo sapiens


Alignment Length:549 Identity:126/549 - (22%)
Similarity:221/549 - (40%) Gaps:142/549 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1437 SSVSTTALTPS-------RQLTDAEKLR-KVVMELVDTERTYVKHLNNLLEHYLEP-MKRETFLS 1492
            |.|....|.|:       |.|.:.:::| .|:.|::.|||.|:|||.::.|.||:. .||....|
Human    90 SDVQNGHLDPNSDCLCLGRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFS 154

  Fly  1493 NAEINALFGNIHEIVTFQRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLY 1557
            :.::..:||||.:|..||..|:::||:..:     |...|       |..||..||.:.:.|.:|
Human   155 DEQLKVIFGNIEDIYRFQMGFVRDLEKQYN-----NDDPH-------LSEIGPCFLEHQDGFWIY 207

  Fly  1558 SSFCASHSKA----QKVLHPNEGNHALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLLLQQM 1618
            |.:|.:|..|    .|::..:...|.   |.|.|..:|.....::.:|:.|:|:|.||||.|.::
Human   208 SEYCNNHLDACMELSKLMKDSRYQHF---FEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAEL 269

  Fly  1619 RNLTDTRADEHVHLCEALKGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQKSC-----KQPIDLS 1678
            ...|.....::.::..||..|..|.:.|||.:|..|....|     .|.|.|.     :..:|.|
Human   270 LKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKI-----AQWQASVLDWEGEDILDRS 329

  Fly  1679 PGDLLYYGGVEWLNISDFLGKIKKGLELHAMCFVFKSAVVFLCKERLRQKKKLMGVSSKNATNEV 1743
             .:|:|.|.:.|:       ....|.....:.|:|...:| |||:.|.::..|.      ....:
Human   330 -SELIYTGEMAWI-------YQPYGRNQQRVFFLFDHQMV-LCKKDLIRRDILY------YKGRI 379

  Fly  1744 EIIRYQVLIPVTEVQVRASSAKDMDSHFLWELIHLRSQLQ---RRSEKVYVLSNSTADFRNAFLK 1805
            ::.:|:|        |.....:|.|.:     :.:::..:   :.:|::::......:.:..:|:
Human   380 DMDKYEV--------VDIEDGRDDDFN-----VSMKNAFKLHNKETEEIHLFFAKKLEEKIRWLR 431

  Fly  1806 TIRQ---IIRESVRNMSIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLERPKQQITIVHGSHT 1867
            ..|:   :::|..:                          :|:    :..|..|:|..:     |
Human   432 AFREERKMVQEDEK--------------------------IGF----EISENQKRQAAM-----T 461

  Fly  1868 LGK-PKKKSGSQRHSAGNIDYDNLSGSQEADDLPPSVGVVHYASGH---THGQQMQPAGFRGRSK 1928
            :.| ||:|                 |...|..:|||     |....   .|||.:.|.|.     
Human   462 VRKVPKQK-----------------GVNSARSVPPS-----YPPPQDPLNHGQYLVPDGI----- 499

  Fly  1929 TVGDVTEITCSSPEPHQQQQQQQQQQQQL 1957
            ....|.|.|    ||.:.|....|...:|
Human   500 AQSQVFEFT----EPKRSQSPFWQNFSRL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sifNP_001261446.1 WH1 35..144 CDD:214674
PH1_Tiam1_2 860..985 CDD:269937
PH 873..974 CDD:278594
TIAM1_RBD 1141..1219 CDD:176413
PDZ_signaling 1221..1308 CDD:238492
RhoGEF 1456..1647 CDD:238091 59/196 (30%)
PH2_Tiam1_2 1650..1823 CDD:269957 30/183 (16%)
PH 1693..1812 CDD:278594 17/124 (14%)
ARHGEF9NP_001340852.1 SH3_ARHGEF9 20..81 CDD:212908
RhoGEF 120..299 CDD:214619 59/193 (31%)
PH_Collybistin_ASEF 304..443 CDD:269931 28/171 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3519
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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