DRSC/TRiP Functional Genomics Resources

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Protein Alignment sif and ARHGEF19

DIOPT Version :9

Sequence 1:NP_001261446.1 Gene:sif / 43892 FlyBaseID:FBgn0085447 Length:2734 Species:Drosophila melanogaster
Sequence 2:NP_694945.2 Gene:ARHGEF19 / 128272 HGNCID:26604 Length:802 Species:Homo sapiens


Alignment Length:539 Identity:118/539 - (21%)
Similarity:195/539 - (36%) Gaps:183/539 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1293 LESVLQEEQSLSMMMRSSRTEPPDLVGIMRVTDDMIDSLVCPPPPTDPPVMSEEMITGLIVPAPG 1357
            |.|||.:|.|.....|..|.:..:..|                 |.|....:||        .||
Human   290 LNSVLYQEYSDVASARELRRQQREEEG-----------------PGDEAEGAEE--------GPG 329

  Fly  1358 WNGTSKDLYSPEAESSPATSFVDPAAMAAQLAVGGVGGVVVGGLGVAKPTSRTSSFEIENLLKTA 1422
                     .|.|..||::||                        .|:.::|.|:|.:...:   
Human   330 ---------PPRANLSPSSSF------------------------RAQRSARGSTFSLWQDI--- 358

  Fly  1423 EQETRKSSPTGSVTSSVSTTALTPSRQLTDAEKLRKVVMELVDTERTYVKHLNNLLEHYLEPMKR 1487
                          ..|..:.:..:..|.|. ||::...||:.:|.:|:..|:..:.|:|...:.
Human   359 --------------PDVRGSGVLATLSLRDC-KLQEAKFELITSEASYIHSLSVAVGHFLGSAEL 408

  Fly  1488 ETFLSNAEINALFGNIHEIVTFQRQFLQNLEESLDLEPDFNKF-------EHCGQFRNVLFAIGS 1545
            ...|...:...||..:.|:.:...:|||:||:.  ||.|..:|       :||..||.|      
Human   409 SECLGAQDKQWLFSKLPEVKSTSERFLQDLEQR--LEADVLRFSVCDVVLDHCPAFRRV------ 465

  Fly  1546 AFLYYVNH----FKLYSSFCASHSKAQKVLHPNEGNHALQEFLAARNPKQQHSSTLESYLIKPIQ 1606
             :|.||.:    .:.|......:.:...:|...|.:...|     |.|       |.|:||.|.|
Human   466 -YLPYVTNQAYQERTYQRLLLENPRFPGILARLEESPVCQ-----RLP-------LTSFLILPFQ 517

  Fly  1607 RILKYPLLLQQMRNLT---------DTRA----DEHVHLCEA-LKGMEKVAEHINEMQRIHEEYG 1657
            ||.:..:|::.:...|         .|:|    .|.|..|.| ::.|::..|.|:..::||.| |
Human   518 RITRLKMLVENILKRTAQGSEDEDMATKAFNALKELVQECNASVQSMKRTEELIHLSKKIHFE-G 581

  Fly  1658 AIFD------HLFRQHQKSCKQPIDLSPGDLLYYGGVEWLNISDFLGKIK---KGLELHAMCFVF 1713
            .||.      .|.|..:.....|:..:|.                 .|:|   |.:.||    :|
Human   582 KIFPLISQARWLVRHGELVELAPLPAAPP-----------------AKLKLSSKAVYLH----LF 625

  Fly  1714 KSAVVFLCKERLRQKKKLMGVSSKNATNEVEIIRYQVLI--PVTEVQVRASSAK--DMDSH-FLW 1773
            ...:       |..::|.:|             ::.|.:  .:.|:|||..|.|  .:..| ||.
Human   626 NDCL-------LLSRRKELG-------------KFAVFVHAKMAELQVRDLSLKLQGIPGHVFLL 670

  Fly  1774 ELI---HLRSQ--LQRRSE 1787
            :|:   |::.|  |:.|:|
Human   671 QLLHGQHMKHQFLLRARTE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sifNP_001261446.1 WH1 35..144 CDD:214674
PH1_Tiam1_2 860..985 CDD:269937
PH 873..974 CDD:278594
TIAM1_RBD 1141..1219 CDD:176413
PDZ_signaling 1221..1308 CDD:238492 6/14 (43%)
RhoGEF 1456..1647 CDD:238091 53/215 (25%)
PH2_Tiam1_2 1650..1823 CDD:269957 35/157 (22%)
PH 1693..1812 CDD:278594 25/108 (23%)
ARHGEF19NP_694945.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Herpes_ICP4_C 10..>353 CDD:332854 24/120 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..138
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..190
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..283
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..342 14/93 (15%)
RhoGEF 382..558 CDD:306973 48/196 (24%)
PH_ephexin 580..706 CDD:269929 33/152 (22%)
SH3_ARHGEF5_19 719..773 CDD:212873
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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