Sequence 1: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006253478.1 | Gene: | Mcf2l / 117020 | RGDID: | 619782 | Length: | 1280 | Species: | Rattus norvegicus |
Alignment Length: | 1665 | Identity: | 325/1665 - (19%) |
---|---|---|---|
Similarity: | 543/1665 - (32%) | Gaps: | 555/1665 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 620 SLPGSNQRSPYPLR-----RPNAKSSTLPLPPHRPLSTIRDKERDRDRDGYYSDRNELIRERERE 679
Fly 680 RDRGYLSDHNSSFSNSRCASCIGESARAQWFRHSDGWRSGSSTIGS-GSGHGMMTQQIPGSGHKR 743
Fly 744 SPWDSLPSLRQDSSLNDSGYKSARADSLEQRAEFIRQDSLRSEYLSDRESRYGIVQQASIESTDS 808
Fly 809 RMCYLTSSEISDDDRMSLTTAVSDE--------------DDGESVMASP-YKA------KATGTA 852
Fly 853 ASSFNCTGAVRKA--GFLSVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVE 915
Fly 916 AAPKHLIIVDGAIMQPIP--EHPKRDYIFCLSTAFGDAYLFQAPCQV-----ELENWVNSIH--- 970
Fly 971 ------SACAAAFARHRGKTGTLHLLQEEIFRLEKAIESDHKLKHMAELQ-------QSVVTDQE 1022
Fly 1023 T------RHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNP---KSLLTHVSRPTKNTL 1078
Fly 1079 NKLGVFTVSSFHAFICARSPSL-----LNNLLAGRGATKRRPPMLSR-----SNSGSSRRSMQMN 1133
Fly 1134 SRDEPEKTFKVAMPDNAYSTVYLRDAMSVEEFLASACARRNLNPMEHFV------RVKKRRDMED 1192
Fly 1193 HNYF---VPHRNDLIENYLHNHEFVEVCMKILYQVELQRTTLEQMWG----FSVEAELIENAERQ 1250
Fly 1251 DELCCYVSRVE-------DKSVAMHNGIIKGDEIMVINGAIVSDLDMMYLESVLQEEQSLSMMMR 1308
Fly 1309 SSRTEPPDLVGIMRVTDDMIDSLVCPPPPTDPPVMSEEMITGLIVPAPG-WNGTSKDLYSPEAES 1372
Fly 1373 SPATSFVDPAAMAAQLAVGGVGGVVVGGLGVAKPTSRTSSFEIENLLKTAEQETRKSSPTGSVTS 1437
Fly 1438 SVSTTALTPSRQLTDAEKLRKVVM-ELVDTERTYVKHLNNLLEHYLEPMKR-------ETFLSNA 1494
Fly 1495 EINALFGNIHEIVTF-QRQFLQNLEESLDLEPDFNKFEHCGQFRNVLFAIGSAFLYYVNHFKLYS 1558
Fly 1559 SFCASHSKAQKVLHPNEGNHALQEFLAARNPKQQHSSTLESYLIKPIQRILKYPLLLQQMRNLTD 1623
Fly 1624 TRADEHVH----LCEALKGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSPGD--- 1681
Fly 1682 LLYYGGVE-WLNISDFLGKIK-----KGLELHAMCFVFKSAVVFLCKERLRQ---KKKLMGVSSK 1737
Fly 1738 NATNEVEIIRYQVLIPVTEVQVRASSAKDMDSHFLWELIHLRSQLQRRSEKVYVLSNSTADFRNA 1802
Fly 1803 FLKTIRQII-------RESVRNM------SIPMKNFGGSSGSVSGHSSQGMGSMGYPGNSQTLER 1854
Fly 1855 PKQQITIVHG--SHTLGKPKKK-------SGSQRHSAGNIDYDNLSG-----SQEADDLPPSVGV 1905
Fly 1906 VHYASGHTHGQQMQPAGFRGRSKTVGDVTEITCSSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPH 1970
Fly 1971 PHPREPPPPPIRQPHLHHHSSDIERIDPG--------TKSEGEEDSQQGTIRPKATLGRTPNHLT 2027
Fly 2028 L------STTSTLSVGSTGSQARLIQSSHPPASYQPVLMKDLGKPSPDESELESESEVHAAQVAA 2086
Fly 2087 SFNLSLGSSGS---LFASDARDNQTQSRTQSQIHSLHPSP 2123 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 22/142 (15%) | ||
PH | 873..974 | CDD:278594 | 15/116 (13%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 15/86 (17%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 16/97 (16%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 65/203 (32%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 38/197 (19%) | ||
PH | 1693..1812 | CDD:278594 | 26/133 (20%) | ||
Mcf2l | XP_006253478.1 | SEC14 | 145..290 | CDD:214706 | 26/174 (15%) |
SPEC | 421..623 | CDD:238103 | 41/238 (17%) | ||
RhoGEF | 702..879 | CDD:238091 | 64/202 (32%) | ||
PH_Dbs | 886..1017 | CDD:269934 | 34/171 (20%) | ||
PH | 900..1014 | CDD:278594 | 30/137 (22%) | ||
SH3_DBS | 1184..1236 | CDD:212791 | 11/64 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |